Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDHR3Q6ZTQ4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 AC004448.1-201ENST00000458332 883 ntBASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDHR3Q6ZTQ4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 AL137060.1-201ENST00000618151 2648 ntBASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDHR3Q6ZTQ4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.15■■□□□ 1.14
CDHR3Q6ZTQ4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.14■■□□□ 1.14
CDHR3Q6ZTQ4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 MIR6724-1-201ENST00000616420 92 ntBASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 MIR6724-2-201ENST00000616483 92 ntBASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 MIR6724-4-201ENST00000617390 92 ntBASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 MIR6724-3-201ENST00000622482 92 ntBASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 AC087742.1-201ENST00000575880 1738 ntBASIC22.14■■□□□ 1.13
CDHR3Q6ZTQ4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 C11orf96-202ENST00000528572 1834 ntBASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 AC092053.2-201ENST00000640557 1818 ntBASIC22.13■■□□□ 1.13
CDHR3Q6ZTQ4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDHR3Q6ZTQ4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR3Q6ZTQ4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 MIR6722-201ENST00000617286 78 ntBASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 AL117332.1-201ENST00000622628 974 ntBASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.1■■□□□ 1.13
CDHR3Q6ZTQ4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms