Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 MIR3181-201ENST00000578512 73 ntBASIC20.57■□□□□ 0.88
RTL4Q6ZR62 MIR4767-201ENST00000582827 78 ntBASIC20.57■□□□□ 0.88
RTL4Q6ZR62 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 FP325331.1-202ENST00000623531 1380 ntBASIC20.57■□□□□ 0.88
RTL4Q6ZR62 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
RTL4Q6ZR62 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 pRNA.6-201ENST00000610482 90 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 pRNA.5-201ENST00000612139 90 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 pRNA.11-201ENST00000618423 90 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 pRNA.13-201ENST00000619112 90 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 AC136469.2-201ENST00000623944 1028 ntBASIC20.56■□□□□ 0.88
RTL4Q6ZR62 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL4Q6ZR62 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 AL031432.3-201ENST00000607698 485 ntBASIC20.55■□□□□ 0.88
RTL4Q6ZR62 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL4Q6ZR62 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 SUDS3P1-201ENST00000505831 966 ntBASIC20.54■□□□□ 0.88
RTL4Q6ZR62 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL4Q6ZR62 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 AC144652.1-201ENST00000609974 1624 ntBASIC20.53■□□□□ 0.88
RTL4Q6ZR62 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 DUSP8P3-201ENST00000399571 1760 ntBASIC20.53■□□□□ 0.88
RTL4Q6ZR62 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL4Q6ZR62 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.53■□□□□ 0.88
RTL4Q6ZR62 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL4Q6ZR62 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTL4Q6ZR62 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms