Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDKAL1Q5VV42 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDKAL1Q5VV42 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDKAL1Q5VV42 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 LINC01960-201ENST00000563759 1884 ntBASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 BX664725.1-201ENST00000438252 379 ntBASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 AC009086.3-201ENST00000623486 1008 ntBASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.24■■□□□ 1.47
CDKAL1Q5VV42 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.23■■□□□ 1.47
CDKAL1Q5VV42 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CDKAL1Q5VV42 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDKAL1Q5VV42 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 AC092028.1-203ENST00000608262 953 ntBASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.22■■□□□ 1.47
CDKAL1Q5VV42 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 AC009102.2-201ENST00000606772 1639 ntBASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDKAL1Q5VV42 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.2■■□□□ 1.47
CDKAL1Q5VV42 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDKAL1Q5VV42 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.2■■□□□ 1.47
CDKAL1Q5VV42 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CDKAL1Q5VV42 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CDKAL1Q5VV42 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDKAL1Q5VV42 FBXW4P1-201ENST00000426721 2239 ntBASIC24.19■■□□□ 1.46
CDKAL1Q5VV42 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.19■■□□□ 1.46
CDKAL1Q5VV42 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDKAL1Q5VV42 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CDKAL1Q5VV42 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDKAL1Q5VV42 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDKAL1Q5VV42 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.17■■□□□ 1.46
CDKAL1Q5VV42 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDKAL1Q5VV42 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms