Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LIN9Q5TKA1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 AC133561.1-201ENST00000568600 2415 ntBASIC23.87■■□□□ 1.41
LIN9Q5TKA1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 pRNA.6-201ENST00000610482 90 ntBASIC23.87■■□□□ 1.41
LIN9Q5TKA1 pRNA.5-201ENST00000612139 90 ntBASIC23.87■■□□□ 1.41
LIN9Q5TKA1 pRNA.11-201ENST00000618423 90 ntBASIC23.87■■□□□ 1.41
LIN9Q5TKA1 pRNA.13-201ENST00000619112 90 ntBASIC23.87■■□□□ 1.41
LIN9Q5TKA1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LIN9Q5TKA1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 AC087623.3-201ENST00000607047 1098 ntBASIC23.86■■□□□ 1.41
LIN9Q5TKA1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIN9Q5TKA1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
LIN9Q5TKA1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIN9Q5TKA1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LIN9Q5TKA1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIN9Q5TKA1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIN9Q5TKA1 C9orf163-202ENST00000624034 2573 ntBASIC23.83■■□□□ 1.41
LIN9Q5TKA1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.83■■□□□ 1.41
LIN9Q5TKA1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIN9Q5TKA1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LIN9Q5TKA1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LIN9Q5TKA1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 AC126544.1-201ENST00000580842 1059 ntBASIC23.82■■□□□ 1.4
LIN9Q5TKA1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LIN9Q5TKA1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 AL162430.1-201ENST00000480705 870 ntBASIC23.81■■□□□ 1.4
LIN9Q5TKA1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIN9Q5TKA1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIN9Q5TKA1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LIN9Q5TKA1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.8■■□□□ 1.4
LIN9Q5TKA1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.8■■□□□ 1.4
LIN9Q5TKA1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIN9Q5TKA1 AC079630.1-202ENST00000618127 1840 ntBASIC23.8■■□□□ 1.4
LIN9Q5TKA1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LIN9Q5TKA1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms