Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 AL137060.1-201ENST00000618151 2648 ntBASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 TSPY9P-201ENST00000440215 945 ntBASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 TSPY11P-201ENST00000442607 1045 ntBASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.05■□□□□ 0.64
ATPAF1Q5TC12 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATPAF1Q5TC12 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATPAF1Q5TC12 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 AC005703.6-201ENST00000623265 1329 ntBASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATPAF1Q5TC12 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.02■□□□□ 0.63
ATPAF1Q5TC12 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF1Q5TC12 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF1Q5TC12 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATPAF1Q5TC12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 KRT16P3-201ENST00000439127 1283 ntBASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MIR6724-1-201ENST00000616420 92 ntBASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MIR6724-2-201ENST00000616483 92 ntBASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MIR6724-4-201ENST00000617390 92 ntBASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MIR6724-3-201ENST00000622482 92 ntBASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATPAF1Q5TC12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATPAF1Q5TC12 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATPAF1Q5TC12 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATPAF1Q5TC12 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms