Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 MKRN4P-201ENST00000444706 1521 ntBASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 PRKY-204ENST00000533551 1019 ntBASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.47■■□□□ 1.67
COL13A1Q5TAT6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL13A1Q5TAT6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL13A1Q5TAT6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.67
COL13A1Q5TAT6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 TPM4P1-201ENST00000436100 807 ntBASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 AC026366.1-201ENST00000488803 879 ntBASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 AC079140.4-201ENST00000507448 529 ntBASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.45■■□□□ 1.66
COL13A1Q5TAT6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.44■■□□□ 1.66
COL13A1Q5TAT6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL13A1Q5TAT6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 TMPOP1-202ENST00000424642 1267 ntBASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL13A1Q5TAT6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 MYC-209ENST00000641252 345 ntBASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL13A1Q5TAT6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 AC104187.1-201ENST00000607510 612 ntBASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL13A1Q5TAT6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 AC097658.1-201ENST00000475555 843 ntBASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 MYCNOS-205ENST00000641950 531 ntBASIC25.39■■□□□ 1.66
COL13A1Q5TAT6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL13A1Q5TAT6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 POU5F1P4-201ENST00000413175 1085 ntBASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL13A1Q5TAT6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms