Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 MET12YPL023C 1974 nt4.16□□□□□ -1.74
RUP1Q12242 RAD7YJR052W 1698 nt4.16□□□□□ -1.74
RUP1Q12242 MMT1YMR177W 1533 nt4.16□□□□□ -1.74
RUP1Q12242 JHD2YJR119C 2187 nt4.16□□□□□ -1.74
RUP1Q12242 IRC6YFR043C 714 nt4.16□□□□□ -1.74
RUP1Q12242 SIW14YNL032W 846 nt4.16□□□□□ -1.74
RUP1Q12242 FSH3YOR280C 801 nt4.16□□□□□ -1.74
RUP1Q12242 YOR342CYOR342C 960 nt4.16□□□□□ -1.74
RUP1Q12242 PFK1YGR240C 2964 nt4.16□□□□□ -1.74
RUP1Q12242 MNN1YER001W 2289 nt4.15□□□□□ -1.74
RUP1Q12242 FMP30YPL103C 1407 nt4.15□□□□□ -1.74
RUP1Q12242 PTC1YDL006W 846 nt4.15□□□□□ -1.75
RUP1Q12242 YDL124WYDL124W 939 nt4.15□□□□□ -1.75
RUP1Q12242 NSE3YDR288W 912 nt4.15□□□□□ -1.75
RUP1Q12242 SDT1YGL224C 843 nt4.15□□□□□ -1.75
RUP1Q12242 YIL089WYIL089W 618 nt4.15□□□□□ -1.75
RUP1Q12242 SFH5YJL145W 885 nt4.15□□□□□ -1.75
RUP1Q12242 YAR023CYAR023C 540 nt4.15□□□□□ -1.75
RUP1Q12242 VPS21YOR089C 633 nt4.15□□□□□ -1.75
RUP1Q12242 EFM2YBR271W 1260 nt4.15□□□□□ -1.75
RUP1Q12242 IKS1YJL057C 2004 nt4.15□□□□□ -1.75
RUP1Q12242 SLM5YCR024C 1479 nt4.15□□□□□ -1.75
RUP1Q12242 SOF1YLL011W 1470 nt4.15□□□□□ -1.75
RUP1Q12242 SRP72YPL210C 1923 nt4.15□□□□□ -1.75
RUP1Q12242 KEX1YGL203C 2190 nt4.14□□□□□ -1.75
RUP1Q12242 PIM1YBL022C 3402 nt4.14□□□□□ -1.75
RUP1Q12242 ALG11YNL048W 1647 nt4.14□□□□□ -1.75
RUP1Q12242 RPB2YOR151C 3675 nt4.14□□□□□ -1.75
RUP1Q12242 IRC9YJL142C 393 nt4.14□□□□□ -1.75
RUP1Q12242 YNK1YKL067W 462 nt4.14□□□□□ -1.75
RUP1Q12242 YKL071WYKL071W 771 nt4.14□□□□□ -1.75
RUP1Q12242 NSE1YLR007W 1011 nt4.14□□□□□ -1.75
RUP1Q12242 SEC72YLR292C 582 nt4.14□□□□□ -1.75
RUP1Q12242 NMD4YLR363C 657 nt4.14□□□□□ -1.75
RUP1Q12242 YLR407WYLR407W 687 nt4.14□□□□□ -1.75
RUP1Q12242 YBL077WYBL077W 432 nt4.14□□□□□ -1.75
RUP1Q12242 YOR034C-AYOR034C-A 243 nt4.14□□□□□ -1.75
RUP1Q12242 YPL278CYPL278C 303 nt4.14□□□□□ -1.75
RUP1Q12242 YMR111CYMR111C 1389 nt4.14□□□□□ -1.75
RUP1Q12242 TYR1YBR166C 1359 nt4.14□□□□□ -1.75
RUP1Q12242 GPB1YOR371C 2694 nt4.13□□□□□ -1.75
RUP1Q12242 CHD1YER164W 4407 nt4.13□□□□□ -1.75
RUP1Q12242 MDM30YLR368W 1797 nt4.13□□□□□ -1.75
RUP1Q12242 YCR101CYCR101C 549 nt4.13□□□□□ -1.75
RUP1Q12242 YDL241WYDL241W 372 nt4.13□□□□□ -1.75
RUP1Q12242 RDN5-1RDN5-1 121 nt4.13□□□□□ -1.75
RUP1Q12242 KTR2YKR061W 1278 nt4.13□□□□□ -1.75
RUP1Q12242 RDN5-6RDN5-6 121 nt4.13□□□□□ -1.75
RUP1Q12242 BLS1YLR408C 369 nt4.13□□□□□ -1.75
RUP1Q12242 HEK2YBL032W 1146 nt4.13□□□□□ -1.75
RUP1Q12242 MFM1YPL060W 1242 nt4.13□□□□□ -1.75
RUP1Q12242 INA17YPL099C 549 nt4.13□□□□□ -1.75
RUP1Q12242 LYP1YNL268W 1836 nt4.13□□□□□ -1.75
RUP1Q12242 SMF1YOL122C 1728 nt4.12□□□□□ -1.75
RUP1Q12242 NAM9YNL137C 1461 nt4.12□□□□□ -1.75
RUP1Q12242 YCR050CYCR050C 309 nt4.12□□□□□ -1.75
RUP1Q12242 CIR1YGR207C 786 nt4.12□□□□□ -1.75
RUP1Q12242 YML119WYML119W 1074 nt4.12□□□□□ -1.75
RUP1Q12242 RNA1YMR235C 1224 nt4.12□□□□□ -1.75
RUP1Q12242 YNL057WYNL057W 333 nt4.12□□□□□ -1.75
RUP1Q12242 CUZ1YNL155W 825 nt4.12□□□□□ -1.75
RUP1Q12242 WRS1YOL097C 1299 nt4.12□□□□□ -1.75
RUP1Q12242 PEP4YPL154C 1218 nt4.12□□□□□ -1.75
RUP1Q12242 YSA1YBR111C 696 nt4.12□□□□□ -1.75
RUP1Q12242 IOC4YMR044W 1428 nt4.12□□□□□ -1.75
RUP1Q12242 GRX6YDL010W 696 nt4.11□□□□□ -1.75
RUP1Q12242 NUS1YDL193W 1128 nt4.11□□□□□ -1.75
RUP1Q12242 NBP2YDR162C 711 nt4.11□□□□□ -1.75
RUP1Q12242 SCL1YGL011C 759 nt4.11□□□□□ -1.75
RUP1Q12242 LSB1YGR136W 726 nt4.11□□□□□ -1.75
RUP1Q12242 ORM2YLR350W 651 nt4.11□□□□□ -1.75
RUP1Q12242 YNL234WYNL234W 1281 nt4.11□□□□□ -1.75
RUP1Q12242 PFA4YOL003C 1137 nt4.11□□□□□ -1.75
RUP1Q12242 CNS1YBR155W 1158 nt4.11□□□□□ -1.75
RUP1Q12242 CDC6YJL194W 1542 nt4.11□□□□□ -1.75
RUP1Q12242 MCM2YBL023C 2607 nt4.1□□□□□ -1.75
RUP1Q12242 DIP2YLR129W 2832 nt4.1□□□□□ -1.75
RUP1Q12242 YHL045WYHL045W 348 nt4.1□□□□□ -1.75
RUP1Q12242 YMR084WYMR084W 789 nt4.1□□□□□ -1.75
RUP1Q12242 RRN9YMR270C 1098 nt4.1□□□□□ -1.75
RUP1Q12242 YBL059WYBL059W 582 nt4.1□□□□□ -1.75
RUP1Q12242 MDM38YOL027C 1722 nt4.09□□□□□ -1.75
RUP1Q12242 GIP4YAL031C 2283 nt4.09□□□□□ -1.75
RUP1Q12242 RXT3YDL076C 885 nt4.09□□□□□ -1.75
RUP1Q12242 YGR204C-AYGR204C-A 114 nt4.09□□□□□ -1.75
RUP1Q12242 YGR219WYGR219W 342 nt4.09□□□□□ -1.75
RUP1Q12242 YHR112CYHR112C 1137 nt4.09□□□□□ -1.75
RUP1Q12242 ATP12YJL180C 978 nt4.09□□□□□ -1.75
RUP1Q12242 YAE1YJR067C 426 nt4.09□□□□□ -1.75
RUP1Q12242 CNB1YKL190W 528 nt4.09□□□□□ -1.75
RUP1Q12242 YLR049CYLR049C 1287 nt4.09□□□□□ -1.75
RUP1Q12242 NKP2YLR315W 462 nt4.09□□□□□ -1.75
RUP1Q12242 CDC73YLR418C 1182 nt4.09□□□□□ -1.75
RUP1Q12242 YBR056W-AYBR056W-A 201 nt4.09□□□□□ -1.75
RUP1Q12242 GDT1YBR187W 843 nt4.09□□□□□ -1.75
RUP1Q12242 AZR1YGR224W 1842 nt4.09□□□□□ -1.76
RUP1Q12242 FLO8YER109C 2400 nt4.09□□□□□ -1.76
RUP1Q12242 KRE28YDR532C 1158 nt4.08□□□□□ -1.76
RUP1Q12242 HOM3YER052C 1584 nt4.08□□□□□ -1.76
RUP1Q12242 MNL1YHR204W 2391 nt4.08□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms