Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.54■□□□□ 0.56
COL10A1Q03692 AC241377.3-202ENST00000626088 1088 ntBASIC18.54■□□□□ 0.56
COL10A1Q03692 AC241585.3-202ENST00000628937 1088 ntBASIC18.54■□□□□ 0.56
COL10A1Q03692 AC245100.8-202ENST00000629247 1058 ntBASIC18.54■□□□□ 0.56
COL10A1Q03692 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL10A1Q03692 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL10A1Q03692 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
COL10A1Q03692 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.53■□□□□ 0.56
COL10A1Q03692 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL10A1Q03692 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.53■□□□□ 0.56
COL10A1Q03692 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.53■□□□□ 0.56
COL10A1Q03692 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.53■□□□□ 0.56
COL10A1Q03692 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.53■□□□□ 0.56
COL10A1Q03692 AL512631.2-201ENST00000604634 923 ntBASIC18.53■□□□□ 0.56
COL10A1Q03692 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.53■□□□□ 0.56
COL10A1Q03692 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 AC233723.2-201ENST00000623798 2106 ntBASIC18.53■□□□□ 0.56
COL10A1Q03692 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
COL10A1Q03692 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL10A1Q03692 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.53■□□□□ 0.56
COL10A1Q03692 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL10A1Q03692 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.52■□□□□ 0.56
COL10A1Q03692 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.52■□□□□ 0.56
COL10A1Q03692 SRD5A1P1-201ENST00000442297 786 ntBASIC18.52■□□□□ 0.56
COL10A1Q03692 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.52■□□□□ 0.56
COL10A1Q03692 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.52■□□□□ 0.56
COL10A1Q03692 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL10A1Q03692 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL10A1Q03692 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
COL10A1Q03692 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.51■□□□□ 0.55
COL10A1Q03692 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.51■□□□□ 0.55
COL10A1Q03692 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 AC099791.2-201ENST00000605725 427 ntBASIC18.51■□□□□ 0.55
COL10A1Q03692 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 AC004687.1-201ENST00000579003 1625 ntBASIC18.51■□□□□ 0.55
COL10A1Q03692 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.51■□□□□ 0.55
COL10A1Q03692 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL10A1Q03692 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL10A1Q03692 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.51■□□□□ 0.55
COL10A1Q03692 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL10A1Q03692 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL10A1Q03692 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.5■□□□□ 0.55
COL10A1Q03692 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.5■□□□□ 0.55
COL10A1Q03692 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.5■□□□□ 0.55
COL10A1Q03692 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.5■□□□□ 0.55
COL10A1Q03692 AC006455.2-201ENST00000429931 906 ntBASIC18.5■□□□□ 0.55
COL10A1Q03692 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.5■□□□□ 0.55
COL10A1Q03692 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.5■□□□□ 0.55
COL10A1Q03692 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.5■□□□□ 0.55
COL10A1Q03692 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL10A1Q03692 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL10A1Q03692 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.49■□□□□ 0.55
COL10A1Q03692 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL10A1Q03692 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.49■□□□□ 0.55
COL10A1Q03692 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL10A1Q03692 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.49■□□□□ 0.55
COL10A1Q03692 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.49■□□□□ 0.55
COL10A1Q03692 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms