Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AP004609.3-201ENST00000610705 1884 ntBASIC20.74■□□□□ 0.91
CACNA1BQ00975 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CACNA1BQ00975 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 AC133637.1-201ENST00000624115 1537 ntBASIC20.73■□□□□ 0.91
CACNA1BQ00975 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNA1BQ00975 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1BQ00975 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 SNORA78-201ENST00000459373 127 ntBASIC20.72■□□□□ 0.91
CACNA1BQ00975 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1BQ00975 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 RN7SL850P-201ENST00000579959 291 ntBASIC20.72■□□□□ 0.91
CACNA1BQ00975 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1BQ00975 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 TPM4P1-201ENST00000436100 807 ntBASIC20.72■□□□□ 0.91
CACNA1BQ00975 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1BQ00975 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1BQ00975 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.71■□□□□ 0.91
CACNA1BQ00975 C2orf69P4-201ENST00000565394 541 ntBASIC20.71■□□□□ 0.91
CACNA1BQ00975 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
CACNA1BQ00975 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CACNA1BQ00975 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1BQ00975 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.7■□□□□ 0.91
CACNA1BQ00975 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 AC073648.6-201ENST00000641589 218 ntBASIC20.7■□□□□ 0.9
CACNA1BQ00975 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1BQ00975 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1BQ00975 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 POU5F1P4-201ENST00000413175 1085 ntBASIC20.69■□□□□ 0.9
CACNA1BQ00975 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CACNA1BQ00975 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1BQ00975 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CACNA1BQ00975 TMPOP1-202ENST00000424642 1267 ntBASIC20.68■□□□□ 0.9
CACNA1BQ00975 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.68■□□□□ 0.9
CACNA1BQ00975 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 AC097493.4-201ENST00000641197 219 ntBASIC20.68■□□□□ 0.9
CACNA1BQ00975 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CACNA1BQ00975 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1BQ00975 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA1BQ00975 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNA1BQ00975 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CACNA1BQ00975 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1BQ00975 AC026366.1-201ENST00000488803 879 ntBASIC20.67■□□□□ 0.9
CACNA1BQ00975 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CACNA1BQ00975 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA1BQ00975 MKRN4P-201ENST00000444706 1521 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms