Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H2BCP62807 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H2BCP62807 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H2BCP62807 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H2BCP62807 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HIST1H2BCP62807 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HIST1H2BCP62807 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H2BCP62807 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H2BCP62807 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H2BCP62807 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.67■□□□□ 0.26
HIST1H2BCP62807 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms