Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
RAB38P57729 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.78■□□□□ 0.92
RAB38P57729 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB38P57729 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB38P57729 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB38P57729 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB38P57729 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB38P57729 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB38P57729 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB38P57729 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAB38P57729 BX842568.3-201ENST00000418104 571 ntBASIC20.77■□□□□ 0.92
RAB38P57729 SLC47A1P1-202ENST00000449666 945 ntBASIC20.77■□□□□ 0.92
RAB38P57729 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB38P57729 AC010525.1-201ENST00000585559 441 ntBASIC20.77■□□□□ 0.92
RAB38P57729 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB38P57729 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB38P57729 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB38P57729 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB38P57729 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB38P57729 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB38P57729 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB38P57729 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB38P57729 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB38P57729 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB38P57729 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RAB38P57729 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB38P57729 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB38P57729 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB38P57729 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 AL355001.2-201ENST00000620617 1191 ntBASIC20.76■□□□□ 0.91
RAB38P57729 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB38P57729 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
RAB38P57729 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB38P57729 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB38P57729 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB38P57729 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB38P57729 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB38P57729 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB38P57729 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB38P57729 AL031432.3-201ENST00000607698 485 ntBASIC20.75■□□□□ 0.91
RAB38P57729 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RAB38P57729 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB38P57729 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RAB38P57729 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB38P57729 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAB38P57729 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB38P57729 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB38P57729 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB38P57729 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB38P57729 MIR638-201ENST00000385237 100 ntBASIC20.74■□□□□ 0.91
RAB38P57729 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB38P57729 AP001330.3-201ENST00000520123 633 ntBASIC20.74■□□□□ 0.91
RAB38P57729 AC233992.3-201ENST00000607491 485 ntBASIC20.74■□□□□ 0.91
RAB38P57729 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB38P57729 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB38P57729 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB38P57729 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB38P57729 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB38P57729 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB38P57729 AC027682.1-201ENST00000562846 899 ntBASIC20.73■□□□□ 0.91
RAB38P57729 AF213884.3-201ENST00000563833 479 ntBASIC20.73■□□□□ 0.91
RAB38P57729 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB38P57729 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB38P57729 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB38P57729 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RAB38P57729 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RAB38P57729 C9orf163-202ENST00000624034 2573 ntBASIC20.72■□□□□ 0.91
RAB38P57729 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB38P57729 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB38P57729 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB38P57729 AC005837.3-201ENST00000612163 286 ntBASIC20.72■□□□□ 0.91
RAB38P57729 AL031602.1-201ENST00000633169 911 ntBASIC20.72■□□□□ 0.91
RAB38P57729 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB38P57729 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB38P57729 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB38P57729 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB38P57729 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms