Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PDE1AP54750 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PDE1AP54750 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PDE1AP54750 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.07■■□□□ 1.92
PDE1AP54750 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.07■■□□□ 1.92
PDE1AP54750 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.07■■□□□ 1.92
PDE1AP54750 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PDE1AP54750 GUSBP5-202ENST00000510805 1989 ntBASIC27.07■■□□□ 1.92
PDE1AP54750 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDE1AP54750 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
PDE1AP54750 SRD5A1P1-201ENST00000442297 786 ntBASIC27.06■■□□□ 1.92
PDE1AP54750 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.06■■□□□ 1.92
PDE1AP54750 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.06■■□□□ 1.92
PDE1AP54750 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
PDE1AP54750 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.06■■□□□ 1.92
PDE1AP54750 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.06■■□□□ 1.92
PDE1AP54750 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDE1AP54750 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
PDE1AP54750 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
PDE1AP54750 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.05■■□□□ 1.92
PDE1AP54750 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDE1AP54750 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PDE1AP54750 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PDE1AP54750 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.05■■□□□ 1.92
PDE1AP54750 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PDE1AP54750 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
PDE1AP54750 AC127496.7-201ENST00000625110 1798 ntBASIC27.04■■□□□ 1.92
PDE1AP54750 pRNA.6-201ENST00000610482 90 ntBASIC27.04■■□□□ 1.92
PDE1AP54750 pRNA.5-201ENST00000612139 90 ntBASIC27.04■■□□□ 1.92
PDE1AP54750 pRNA.11-201ENST00000618423 90 ntBASIC27.04■■□□□ 1.92
PDE1AP54750 pRNA.13-201ENST00000619112 90 ntBASIC27.04■■□□□ 1.92
PDE1AP54750 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PDE1AP54750 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PDE1AP54750 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PDE1AP54750 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDE1AP54750 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDE1AP54750 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDE1AP54750 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PDE1AP54750 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.03■■□□□ 1.92
PDE1AP54750 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PDE1AP54750 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.03■■□□□ 1.92
PDE1AP54750 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PDE1AP54750 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
PDE1AP54750 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.92
PDE1AP54750 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PDE1AP54750 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.01■■□□□ 1.91
PDE1AP54750 MIR3181-201ENST00000578512 73 ntBASIC27.01■■□□□ 1.91
PDE1AP54750 EP400NL-214ENST00000641289 2402 ntBASIC27.01■■□□□ 1.91
PDE1AP54750 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PDE1AP54750 AC133637.1-201ENST00000624115 1537 ntBASIC27■■□□□ 1.91
PDE1AP54750 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PDE1AP54750 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDE1AP54750 LINC01960-201ENST00000563759 1884 ntBASIC27■■□□□ 1.91
PDE1AP54750 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PDE1AP54750 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.99■■□□□ 1.91
PDE1AP54750 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PDE1AP54750 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PDE1AP54750 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
PDE1AP54750 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.99■■□□□ 1.91
PDE1AP54750 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
PDE1AP54750 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
PDE1AP54750 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE1AP54750 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE1AP54750 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE1AP54750 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.98■■□□□ 1.91
PDE1AP54750 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
PDE1AP54750 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.98■■□□□ 1.91
PDE1AP54750 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.98■■□□□ 1.91
PDE1AP54750 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.98■■□□□ 1.91
PDE1AP54750 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE1AP54750 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDE1AP54750 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
PDE1AP54750 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.97■■□□□ 1.91
PDE1AP54750 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.97■■□□□ 1.91
PDE1AP54750 AC080038.3-201ENST00000623346 1952 ntBASIC26.97■■□□□ 1.91
PDE1AP54750 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 AC079834.2-201ENST00000609776 1949 ntBASIC26.97■■□□□ 1.91
PDE1AP54750 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.97■■□□□ 1.91
PDE1AP54750 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.97■■□□□ 1.91
PDE1AP54750 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
PDE1AP54750 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE1AP54750 ECEL1P1-201ENST00000373592 1742 ntBASIC26.96■■□□□ 1.91
PDE1AP54750 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PDE1AP54750 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PDE1AP54750 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms