Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
POLR2JP52435 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
POLR2JP52435 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR2JP52435 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR2JP52435 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR2JP52435 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR2JP52435 AC103834.1-201ENST00000520383 144 ntBASIC21.08■□□□□ 0.97
POLR2JP52435 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.08■□□□□ 0.97
POLR2JP52435 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR2JP52435 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
POLR2JP52435 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
POLR2JP52435 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 FP325331.1-202ENST00000623531 1380 ntBASIC21.08■□□□□ 0.96
POLR2JP52435 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2JP52435 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR2JP52435 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
POLR2JP52435 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2JP52435 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2JP52435 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR2JP52435 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2JP52435 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2JP52435 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR2JP52435 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR2JP52435 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2JP52435 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
POLR2JP52435 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR2JP52435 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR2JP52435 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR2JP52435 AC137630.3-201ENST00000607245 391 ntBASIC21.06■□□□□ 0.96
POLR2JP52435 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.06■□□□□ 0.96
POLR2JP52435 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2JP52435 AL137060.1-201ENST00000618151 2648 ntBASIC21.06■□□□□ 0.96
POLR2JP52435 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
POLR2JP52435 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2JP52435 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR2JP52435 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.05■□□□□ 0.96
POLR2JP52435 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2JP52435 AC103724.3-201ENST00000564481 992 ntBASIC21.05■□□□□ 0.96
POLR2JP52435 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
POLR2JP52435 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2JP52435 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
POLR2JP52435 AC005703.6-201ENST00000623265 1329 ntBASIC21.04■□□□□ 0.96
POLR2JP52435 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
POLR2JP52435 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
POLR2JP52435 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR2JP52435 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR2JP52435 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2JP52435 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
POLR2JP52435 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
POLR2JP52435 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR2JP52435 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
POLR2JP52435 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR2JP52435 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2JP52435 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2JP52435 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2JP52435 YBX1P4-201ENST00000392794 808 ntBASIC21.03■□□□□ 0.96
POLR2JP52435 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR2JP52435 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.03■□□□□ 0.96
POLR2JP52435 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
POLR2JP52435 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2JP52435 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2JP52435 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
POLR2JP52435 KRT8P33-201ENST00000508125 1423 ntBASIC21.03■□□□□ 0.96
POLR2JP52435 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR2JP52435 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2JP52435 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2JP52435 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR2JP52435 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR2JP52435 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR2JP52435 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR2JP52435 AC012354.3-201ENST00000623734 483 ntBASIC21.02■□□□□ 0.96
POLR2JP52435 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
POLR2JP52435 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
POLR2JP52435 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
POLR2JP52435 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms