Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK9P50750 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.16■□□□□ 0.98
CDK9P50750 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK9P50750 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK9P50750 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK9P50750 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK9P50750 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK9P50750 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.15■□□□□ 0.98
CDK9P50750 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.15■□□□□ 0.98
CDK9P50750 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK9P50750 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.14■□□□□ 0.98
CDK9P50750 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK9P50750 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CDK9P50750 UNC93B8-201ENST00000511903 705 ntBASIC21.14■□□□□ 0.97
CDK9P50750 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK9P50750 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK9P50750 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDK9P50750 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK9P50750 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK9P50750 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.14■□□□□ 0.97
CDK9P50750 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK9P50750 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK9P50750 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.13■□□□□ 0.97
CDK9P50750 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK9P50750 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK9P50750 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK9P50750 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDK9P50750 MIR6722-201ENST00000617286 78 ntBASIC21.13■□□□□ 0.97
CDK9P50750 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.13■□□□□ 0.97
CDK9P50750 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDK9P50750 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDK9P50750 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CDK9P50750 TSPY9P-201ENST00000440215 945 ntBASIC21.12■□□□□ 0.97
CDK9P50750 TSPY11P-201ENST00000442607 1045 ntBASIC21.12■□□□□ 0.97
CDK9P50750 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK9P50750 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK9P50750 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK9P50750 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK9P50750 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDK9P50750 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK9P50750 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK9P50750 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK9P50750 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CDK9P50750 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.11■□□□□ 0.97
CDK9P50750 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK9P50750 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CDK9P50750 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK9P50750 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CDK9P50750 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK9P50750 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK9P50750 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDK9P50750 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK9P50750 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK9P50750 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
CDK9P50750 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK9P50750 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK9P50750 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK9P50750 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK9P50750 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK9P50750 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDK9P50750 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK9P50750 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK9P50750 AC131212.1-201ENST00000613771 668 ntBASIC21.09■□□□□ 0.97
CDK9P50750 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK9P50750 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CDK9P50750 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDK9P50750 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK9P50750 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK9P50750 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK9P50750 AC005703.6-201ENST00000623265 1329 ntBASIC21.08■□□□□ 0.97
CDK9P50750 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms