Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.82■□□□□ 0.92
CLK3P49761 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.82■□□□□ 0.92
CLK3P49761 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.82■□□□□ 0.92
CLK3P49761 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLK3P49761 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.81■□□□□ 0.92
CLK3P49761 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.81■□□□□ 0.92
CLK3P49761 AL356441.2-201ENST00000443009 864 ntBASIC20.81■□□□□ 0.92
CLK3P49761 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.81■□□□□ 0.92
CLK3P49761 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CLK3P49761 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLK3P49761 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLK3P49761 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLK3P49761 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 AL356740.2-201ENST00000601559 647 ntBASIC20.8■□□□□ 0.92
CLK3P49761 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLK3P49761 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CLK3P49761 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLK3P49761 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK3P49761 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.79■□□□□ 0.92
CLK3P49761 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLK3P49761 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.79■□□□□ 0.92
CLK3P49761 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.79■□□□□ 0.92
CLK3P49761 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.79■□□□□ 0.92
CLK3P49761 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLK3P49761 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.78■□□□□ 0.92
CLK3P49761 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.78■□□□□ 0.92
CLK3P49761 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLK3P49761 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLK3P49761 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.78■□□□□ 0.92
CLK3P49761 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLK3P49761 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLK3P49761 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
CLK3P49761 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK3P49761 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK3P49761 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK3P49761 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK3P49761 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLK3P49761 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK3P49761 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.77■□□□□ 0.92
CLK3P49761 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLK3P49761 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLK3P49761 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.76■□□□□ 0.91
CLK3P49761 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK3P49761 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
CLK3P49761 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.75■□□□□ 0.91
CLK3P49761 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CLK3P49761 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLK3P49761 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.75■□□□□ 0.91
CLK3P49761 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
CLK3P49761 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.75■□□□□ 0.91
CLK3P49761 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLK3P49761 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CLK3P49761 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK3P49761 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
CLK3P49761 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK3P49761 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLK3P49761 AC242852.2-201ENST00000615738 1807 ntBASIC20.74■□□□□ 0.91
CLK3P49761 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms