Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.38■□□□□ 0.374e-7■■■■□ 25.8
MATR3P43243 ROR2-205ENST00000495386 664 ntTSL 315.18■□□□□ 0.024e-7■■■■□ 25.8
MATR3P43243 ROR2-206ENST00000546883 501 ntTSL 314.28□□□□□ -0.124e-7■■■■□ 25.8
MATR3P43243 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.294e-7■■■■□ 25.8
MATR3P43243 ROR2-208ENST00000550066 4360 ntTSL 211.49□□□□□ -0.574e-7■■■■□ 25.8
MATR3P43243 ARHGAP17-207ENST00000571480 645 ntTSL 417.58■□□□□ 0.42e-6■■■■□ 25.8
MATR3P43243 ARHGAP17-211ENST00000573449 574 ntTSL 317.37■□□□□ 0.372e-6■■■■□ 25.8
MATR3P43243 ARHGAP17-217ENST00000575447 559 ntTSL 213.81□□□□□ -0.22e-6■■■■□ 25.8
MATR3P43243 ARHGAP17-212ENST00000573625 602 ntTSL 39.57□□□□□ -0.882e-6■■■■□ 25.8
MATR3P43243 ARHGAP17-203ENST00000455311 810 ntTSL 59.33□□□□□ -0.922e-6■■■■□ 25.8
MATR3P43243 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.751e-6■■■■□ 25.7
MATR3P43243 SLAIN2-204ENST00000510595 550 ntTSL 49.32□□□□□ -0.921e-6■■■■□ 25.7
MATR3P43243 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.83□□□□□ -1.641e-6■■■■□ 25.7
MATR3P43243 KLHDC10-202ENST00000463413 503 ntTSL 228.07■■■□□ 2.085e-7■■■■□ 25.7
MATR3P43243 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.095e-7■■■■□ 25.7
MATR3P43243 KLHDC10-203ENST00000468226 772 ntTSL 37.9□□□□□ -1.145e-7■■■■□ 25.7
MATR3P43243 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC10.07□□□□□ -0.88e-7■■■■□ 25.7
MATR3P43243 STEAP1B-204ENST00000439708 797 ntTSL 35.35□□□□□ -1.558e-7■■■■□ 25.7
MATR3P43243 TAB2-207ENST00000606797 677 ntTSL 58.22□□□□□ -1.092e-7■■■■□ 25.7
MATR3P43243 TAB2-206ENST00000606202 648 ntTSL 43.78□□□□□ -1.82e-7■■■■□ 25.7
MATR3P43243 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.5■□□□□ 0.394e-8■■■■□ 25.7
MATR3P43243 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.49■□□□□ 0.234e-8■■■■□ 25.7
MATR3P43243 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.14e-8■■■■□ 25.7
MATR3P43243 C1RL-205ENST00000537833 561 ntTSL 312.57□□□□□ -0.44e-8■■■■□ 25.7
MATR3P43243 C1RL-204ENST00000534969 532 ntTSL 312.57□□□□□ -0.44e-8■■■■□ 25.7
MATR3P43243 C1RL-208ENST00000543933 592 ntTSL 512.37□□□□□ -0.434e-8■■■■□ 25.7
MATR3P43243 C1RL-209ENST00000543941 539 ntTSL 312.37□□□□□ -0.434e-8■■■■□ 25.7
MATR3P43243 C1RL-211ENST00000545280 449 ntTSL 3 BASIC10.81□□□□□ -0.684e-8■■■■□ 25.7
MATR3P43243 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.24■□□□□ 0.671e-6■■■■□ 25.7
MATR3P43243 TMEM135-203ENST00000525018 753 ntTSL 59.57□□□□□ -0.881e-6■■■■□ 25.7
MATR3P43243 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.71□□□□□ -1.021e-6■■■■□ 25.7
MATR3P43243 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.191e-6■■■■□ 25.7
MATR3P43243 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.32■□□□□ 0.22e-7■■■■□ 25.7
MATR3P43243 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.212e-7■■■■□ 25.7
MATR3P43243 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-7■■■■□ 25.7
MATR3P43243 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-7■■■■□ 25.7
MATR3P43243 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-7■■■■□ 25.7
MATR3P43243 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.92■■□□□ 1.262e-6■■■■□ 25.7
MATR3P43243 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.012e-6■■■■□ 25.7
MATR3P43243 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.58■□□□□ 0.241e-7■■■■□ 25.7
MATR3P43243 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.68□□□□□ -0.061e-7■■■■□ 25.7
MATR3P43243 DBNL-218ENST00000485932 553 ntTSL 422.6■■□□□ 1.211e-6■■■■□ 25.7
MATR3P43243 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.141e-6■■■■□ 25.7
MATR3P43243 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.76■■□□□ 1.071e-6■■■■□ 25.7
MATR3P43243 DBNL-206ENST00000439983 615 ntTSL 421.58■■□□□ 1.051e-6■■■■□ 25.7
MATR3P43243 DBNL-209ENST00000441904 878 ntTSL 321.52■■□□□ 1.041e-6■■■■□ 25.7
MATR3P43243 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 11e-6■■■■□ 25.7
MATR3P43243 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.971e-6■■■■□ 25.7
MATR3P43243 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.08■□□□□ 0.971e-6■■■■□ 25.7
MATR3P43243 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.95■□□□□ 0.941e-6■■■■□ 25.7
MATR3P43243 DBNL-208ENST00000441840 1854 ntTSL 520.79■□□□□ 0.921e-6■■■■□ 25.7
MATR3P43243 DBNL-215ENST00000458579 662 ntTSL 320.55■□□□□ 0.881e-6■■■■□ 25.7
MATR3P43243 DBNL-205ENST00000439815 561 ntTSL 420.07■□□□□ 0.81e-6■■■■□ 25.7
MATR3P43243 DBNL-216ENST00000464762 693 ntTSL 519.96■□□□□ 0.791e-6■■■■□ 25.7
MATR3P43243 DBNL-201ENST00000411855 1447 ntTSL 219.52■□□□□ 0.721e-6■■■■□ 25.7
MATR3P43243 DBNL-222ENST00000498733 1401 ntTSL 219.27■□□□□ 0.681e-6■■■■□ 25.7
MATR3P43243 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19■□□□□ 0.631e-6■■■■□ 25.7
MATR3P43243 DBNL-203ENST00000429716 1622 ntTSL 218.6■□□□□ 0.571e-6■■■■□ 25.7
MATR3P43243 DBNL-202ENST00000423561 634 ntTSL 215.27■□□□□ 0.041e-6■■■■□ 25.7
MATR3P43243 GALK2-220ENST00000560654 784 ntTSL 513.91□□□□□ -0.181e-6■■■■□ 25.7
MATR3P43243 GALK2-216ENST00000560031 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.321e-6■■■■□ 25.7
MATR3P43243 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC12.78□□□□□ -0.361e-6■■■■□ 25.7
MATR3P43243 GALK2-215ENST00000559963 794 ntTSL 211.91□□□□□ -0.51e-6■■■■□ 25.7
MATR3P43243 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC11.3□□□□□ -0.61e-6■■■■□ 25.7
MATR3P43243 GALK2-217ENST00000560119 2053 ntTSL 210.69□□□□□ -0.71e-6■■■■□ 25.7
MATR3P43243 GALK2-211ENST00000559423 895 ntTSL 510.65□□□□□ -0.71e-6■■■■□ 25.7
MATR3P43243 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC10.3□□□□□ -0.761e-6■■■■□ 25.7
MATR3P43243 GALK2-218ENST00000560138 722 ntTSL 510.21□□□□□ -0.771e-6■■■■□ 25.7
MATR3P43243 GALK2-204ENST00000558145 567 ntTSL 410.06□□□□□ -0.81e-6■■■■□ 25.7
MATR3P43243 GALK2-214ENST00000559883 991 ntTSL 49.93□□□□□ -0.821e-6■■■■□ 25.7
MATR3P43243 GALK2-206ENST00000558775 813 ntTSL 39.93□□□□□ -0.821e-6■■■■□ 25.7
MATR3P43243 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.16□□□□□ -0.941e-6■■■■□ 25.7
MATR3P43243 GALK2-210ENST00000559208 861 ntTSL 58.01□□□□□ -1.131e-6■■■■□ 25.7
MATR3P43243 GALK2-207ENST00000558956 641 ntTSL 57.67□□□□□ -1.181e-6■■■■□ 25.7
MATR3P43243 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.31□□□□□ -1.721e-6■■■■□ 25.7
MATR3P43243 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.116e-9■■■■□ 25.7
MATR3P43243 YIPF6-203ENST00000451537 1070 ntTSL 220.77■□□□□ 0.928e-7■■■■□ 25.7
MATR3P43243 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.138e-7■■■■□ 25.7
MATR3P43243 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.58■□□□□ 0.088e-7■■■■□ 25.7
MATR3P43243 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC15.46■□□□□ 0.078e-7■■■■□ 25.7
MATR3P43243 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.088e-7■■■■□ 25.7
MATR3P43243 YIPF6-202ENST00000374643 734 ntTSL 314.44□□□□□ -0.18e-7■■■■□ 25.7
MATR3P43243 ZNF124-205ENST00000491848 701 ntTSL 313.36□□□□□ -0.278e-7■■■■□ 25.7
MATR3P43243 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.328e-7■■■■□ 25.7
MATR3P43243 FGFR1OP-204ENST00000488525 349 ntTSL 510.02□□□□□ -0.811e-10■■■■□ 25.6
MATR3P43243 NELFA-210ENST00000455762 1022 ntTSL 520.11■□□□□ 0.811e-6■■■■□ 25.6
MATR3P43243 NELFA-201ENST00000333877 2228 ntTSL 220.1■□□□□ 0.811e-6■■■■□ 25.6
MATR3P43243 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.84■□□□□ 0.611e-6■■■■□ 25.6
MATR3P43243 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-6■■■■□ 25.6
MATR3P43243 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.77■□□□□ 0.271e-6■■■■□ 25.6
MATR3P43243 NELFA-207ENST00000431323 888 ntTSL 516.54■□□□□ 0.241e-6■■■■□ 25.6
MATR3P43243 NELFA-206ENST00000421397 574 ntTSL 515.86■□□□□ 0.131e-6■■■■□ 25.6
MATR3P43243 NELFA-208ENST00000443203 553 ntTSL 415.45■□□□□ 0.061e-6■■■■□ 25.6
MATR3P43243 NELFA-204ENST00000411649 561 ntTSL 413.12□□□□□ -0.311e-6■■■■□ 25.6
MATR3P43243 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.4■■□□□ 1.668e-7■■■■□ 25.6
MATR3P43243 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.28■□□□□ 0.528e-7■■■■□ 25.6
MATR3P43243 ZNF767P-204ENST00000486492 1616 ntTSL 218.09■□□□□ 0.498e-7■■■■□ 25.6
MATR3P43243 ZNF767P-203ENST00000481762 357 ntTSL 38.93□□□□□ -0.988e-7■■■■□ 25.6
MATR3P43243 SCFD1-212ENST00000554486 819 ntTSL 36.8□□□□□ -1.321e-6■■■■□ 25.6
MATR3P43243 SCFD1-214ENST00000554819 608 ntTSL 53.67□□□□□ -1.821e-6■■■■□ 25.6
Retrieved 100 of 16,209 protein–RNA pairs in 82.1 ms