Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL8A2P25067 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.65■□□□□ 0.58
COL8A2P25067 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.65■□□□□ 0.58
COL8A2P25067 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.65■□□□□ 0.58
COL8A2P25067 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.65■□□□□ 0.58
COL8A2P25067 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL8A2P25067 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.65■□□□□ 0.58
COL8A2P25067 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL8A2P25067 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL8A2P25067 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL8A2P25067 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.64■□□□□ 0.57
COL8A2P25067 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL8A2P25067 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.64■□□□□ 0.57
COL8A2P25067 MIR6821-201ENST00000617625 74 ntBASIC18.64■□□□□ 0.57
COL8A2P25067 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.64■□□□□ 0.57
COL8A2P25067 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL8A2P25067 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL8A2P25067 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL8A2P25067 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL8A2P25067 AC004687.1-201ENST00000579003 1625 ntBASIC18.63■□□□□ 0.57
COL8A2P25067 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL8A2P25067 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.63■□□□□ 0.57
COL8A2P25067 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL8A2P25067 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.63■□□□□ 0.57
COL8A2P25067 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL8A2P25067 AC097381.1-201ENST00000429019 1296 ntBASIC18.63■□□□□ 0.57
COL8A2P25067 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 IGHV3-19-201ENST00000521488 291 ntBASIC18.63■□□□□ 0.57
COL8A2P25067 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL8A2P25067 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COL8A2P25067 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL8A2P25067 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL8A2P25067 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL8A2P25067 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.62■□□□□ 0.57
COL8A2P25067 AC087623.3-201ENST00000607047 1098 ntBASIC18.62■□□□□ 0.57
COL8A2P25067 MIR5787-201ENST00000611784 55 ntBASIC18.62■□□□□ 0.57
COL8A2P25067 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL8A2P25067 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.62■□□□□ 0.57
COL8A2P25067 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL8A2P25067 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL8A2P25067 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.62■□□□□ 0.57
COL8A2P25067 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL8A2P25067 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COL8A2P25067 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
COL8A2P25067 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COL8A2P25067 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.61■□□□□ 0.57
COL8A2P25067 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
COL8A2P25067 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.61■□□□□ 0.57
COL8A2P25067 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.61■□□□□ 0.57
COL8A2P25067 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.61■□□□□ 0.57
COL8A2P25067 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.61■□□□□ 0.57
COL8A2P25067 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL8A2P25067 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.61■□□□□ 0.57
COL8A2P25067 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL8A2P25067 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
COL8A2P25067 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.6■□□□□ 0.57
COL8A2P25067 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.6■□□□□ 0.57
COL8A2P25067 AP005435.1-201ENST00000529293 1178 ntBASIC18.6■□□□□ 0.57
COL8A2P25067 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.6■□□□□ 0.57
COL8A2P25067 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL8A2P25067 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL8A2P25067 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL8A2P25067 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL8A2P25067 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL8A2P25067 MIR572-201ENST00000384983 95 ntBASIC18.59■□□□□ 0.57
COL8A2P25067 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.59■□□□□ 0.57
COL8A2P25067 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.59■□□□□ 0.57
COL8A2P25067 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
COL8A2P25067 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL8A2P25067 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.59■□□□□ 0.57
COL8A2P25067 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.59■□□□□ 0.57
COL8A2P25067 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL8A2P25067 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
COL8A2P25067 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
COL8A2P25067 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
COL8A2P25067 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL8A2P25067 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.59■□□□□ 0.57
COL8A2P25067 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.59■□□□□ 0.57
COL8A2P25067 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms