Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APCP25054 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.9■□□□□ 0.62
APCP25054 AC133552.2-202ENST00000575694 574 ntBASIC18.9■□□□□ 0.62
APCP25054 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.9■□□□□ 0.62
APCP25054 MIR6089-201ENST00000616698 64 ntBASIC18.9■□□□□ 0.62
APCP25054 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APCP25054 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
APCP25054 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APCP25054 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.9■□□□□ 0.62
APCP25054 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.9■□□□□ 0.62
APCP25054 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.89■□□□□ 0.62
APCP25054 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
APCP25054 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.89■□□□□ 0.61
APCP25054 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.89■□□□□ 0.61
APCP25054 AP006294.2-201ENST00000641667 209 ntBASIC18.89■□□□□ 0.61
APCP25054 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APCP25054 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
APCP25054 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APCP25054 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APCP25054 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.88■□□□□ 0.61
APCP25054 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APCP25054 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APCP25054 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APCP25054 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.88■□□□□ 0.61
APCP25054 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.88■□□□□ 0.61
APCP25054 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.88■□□□□ 0.61
APCP25054 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APCP25054 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
APCP25054 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.87■□□□□ 0.61
APCP25054 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.87■□□□□ 0.61
APCP25054 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
APCP25054 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
APCP25054 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.87■□□□□ 0.61
APCP25054 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.87■□□□□ 0.61
APCP25054 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APCP25054 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.87■□□□□ 0.61
APCP25054 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.87■□□□□ 0.61
APCP25054 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APCP25054 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.87■□□□□ 0.61
APCP25054 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.86■□□□□ 0.61
APCP25054 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.86■□□□□ 0.61
APCP25054 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.86■□□□□ 0.61
APCP25054 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.86■□□□□ 0.61
APCP25054 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.86■□□□□ 0.61
APCP25054 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
APCP25054 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.86■□□□□ 0.61
APCP25054 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.86■□□□□ 0.61
APCP25054 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.86■□□□□ 0.61
APCP25054 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APCP25054 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.86■□□□□ 0.61
APCP25054 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.86■□□□□ 0.61
APCP25054 AC133041.1-202ENST00000642053 222 ntBASIC18.86■□□□□ 0.61
APCP25054 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APCP25054 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
APCP25054 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APCP25054 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
APCP25054 AC092118.2-201ENST00000613495 667 ntBASIC18.85■□□□□ 0.61
APCP25054 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.85■□□□□ 0.61
APCP25054 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APCP25054 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APCP25054 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
APCP25054 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.85■□□□□ 0.61
APCP25054 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APCP25054 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.85■□□□□ 0.61
APCP25054 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APCP25054 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APCP25054 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APCP25054 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APCP25054 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.84■□□□□ 0.61
APCP25054 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.84■□□□□ 0.61
APCP25054 RNA5SP413-201ENST00000516373 109 ntBASIC18.84■□□□□ 0.61
APCP25054 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APCP25054 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.84■□□□□ 0.61
APCP25054 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.84■□□□□ 0.61
APCP25054 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.84■□□□□ 0.61
APCP25054 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APCP25054 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.84■□□□□ 0.61
APCP25054 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APCP25054 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.84■□□□□ 0.61
APCP25054 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APCP25054 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.84■□□□□ 0.61
APCP25054 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APCP25054 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms