Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC1P18887 ANOS2P-203ENST00000472227 1816 ntBASIC21.94■■□□□ 1.1
XRCC1P18887 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC1P18887 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
XRCC1P18887 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.94■■□□□ 1.1
XRCC1P18887 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.94■■□□□ 1.1
XRCC1P18887 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC1P18887 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC1P18887 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.94■■□□□ 1.1
XRCC1P18887 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
XRCC1P18887 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC1P18887 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC1P18887 EDA-201ENST00000338901 1233 ntBASIC21.93■■□□□ 1.1
XRCC1P18887 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.93■■□□□ 1.1
XRCC1P18887 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC1P18887 SERBP1P1-201ENST00000396021 1160 ntBASIC21.93■■□□□ 1.1
XRCC1P18887 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
XRCC1P18887 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.93■■□□□ 1.1
XRCC1P18887 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC1P18887 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.93■■□□□ 1.1
XRCC1P18887 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC1P18887 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC1P18887 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.92■■□□□ 1.1
XRCC1P18887 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC1P18887 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC1P18887 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC1P18887 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.92■■□□□ 1.1
XRCC1P18887 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.92■■□□□ 1.1
XRCC1P18887 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC1P18887 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC1P18887 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
XRCC1P18887 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.91■■□□□ 1.1
XRCC1P18887 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 AL031432.3-201ENST00000607698 485 ntBASIC21.91■■□□□ 1.1
XRCC1P18887 AC011298.3-201ENST00000615796 283 ntBASIC21.91■■□□□ 1.1
XRCC1P18887 AL355001.2-201ENST00000620617 1191 ntBASIC21.91■■□□□ 1.1
XRCC1P18887 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
XRCC1P18887 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC1P18887 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
XRCC1P18887 LINC00526-201ENST00000581067 1875 ntBASIC21.9■■□□□ 1.1
XRCC1P18887 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.9■■□□□ 1.1
XRCC1P18887 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
XRCC1P18887 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.9■■□□□ 1.1
XRCC1P18887 AC009086.3-201ENST00000623486 1008 ntBASIC21.9■■□□□ 1.1
XRCC1P18887 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
XRCC1P18887 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC1P18887 DUSP8P3-201ENST00000399571 1760 ntBASIC21.89■■□□□ 1.1
XRCC1P18887 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
XRCC1P18887 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
XRCC1P18887 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC1P18887 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC1P18887 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.89■■□□□ 1.09
XRCC1P18887 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC1P18887 SUDS3P1-201ENST00000505831 966 ntBASIC21.89■■□□□ 1.09
XRCC1P18887 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC1P18887 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC1P18887 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.88■■□□□ 1.09
XRCC1P18887 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
XRCC1P18887 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
XRCC1P18887 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.88■■□□□ 1.09
XRCC1P18887 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.88■■□□□ 1.09
XRCC1P18887 AC006455.2-201ENST00000429931 906 ntBASIC21.88■■□□□ 1.09
XRCC1P18887 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.88■■□□□ 1.09
XRCC1P18887 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.88■■□□□ 1.09
XRCC1P18887 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
XRCC1P18887 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
XRCC1P18887 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC1P18887 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.87■■□□□ 1.09
XRCC1P18887 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.87■■□□□ 1.09
XRCC1P18887 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.87■■□□□ 1.09
XRCC1P18887 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
XRCC1P18887 GUSBP5-202ENST00000510805 1989 ntBASIC21.87■■□□□ 1.09
XRCC1P18887 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC1P18887 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
XRCC1P18887 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
XRCC1P18887 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms