Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MIR3181-201ENST00000578512 73 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 AC104564.3-201ENST00000582367 638 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.41■□□□□ 0.38
PF4V1P10720 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PF4V1P10720 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PF4V1P10720 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.4■□□□□ 0.38
PF4V1P10720 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PF4V1P10720 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PF4V1P10720 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PF4V1P10720 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.4■□□□□ 0.38
PF4V1P10720 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PF4V1P10720 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.4■□□□□ 0.38
PF4V1P10720 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.39■□□□□ 0.37
PF4V1P10720 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PF4V1P10720 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
PF4V1P10720 IRS3P-201ENST00000223076 1006 ntBASIC17.39■□□□□ 0.37
PF4V1P10720 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.39■□□□□ 0.37
PF4V1P10720 AC233992.3-201ENST00000607491 485 ntBASIC17.39■□□□□ 0.37
PF4V1P10720 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PF4V1P10720 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PF4V1P10720 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PF4V1P10720 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.39■□□□□ 0.37
PF4V1P10720 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PF4V1P10720 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PF4V1P10720 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
PF4V1P10720 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.38■□□□□ 0.37
PF4V1P10720 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.38■□□□□ 0.37
PF4V1P10720 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.38■□□□□ 0.37
PF4V1P10720 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 AC126544.1-201ENST00000580842 1059 ntBASIC17.38■□□□□ 0.37
PF4V1P10720 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.38■□□□□ 0.37
PF4V1P10720 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.38■□□□□ 0.37
PF4V1P10720 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PF4V1P10720 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.38■□□□□ 0.37
PF4V1P10720 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PF4V1P10720 BX842568.3-201ENST00000418104 571 ntBASIC17.37■□□□□ 0.37
PF4V1P10720 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PF4V1P10720 AC092068.2-201ENST00000590491 1708 ntBASIC17.37■□□□□ 0.37
PF4V1P10720 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PF4V1P10720 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PF4V1P10720 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PF4V1P10720 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
PF4V1P10720 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PF4V1P10720 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PF4V1P10720 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.37■□□□□ 0.37
PF4V1P10720 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PF4V1P10720 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.36■□□□□ 0.37
PF4V1P10720 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.36■□□□□ 0.37
PF4V1P10720 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.36■□□□□ 0.37
PF4V1P10720 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PF4V1P10720 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.36■□□□□ 0.37
PF4V1P10720 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.36■□□□□ 0.37
PF4V1P10720 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.36■□□□□ 0.37
PF4V1P10720 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PF4V1P10720 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.36■□□□□ 0.37
PF4V1P10720 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PF4V1P10720 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms