Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MRPL3P09001 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MRPL3P09001 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL3P09001 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRPL3P09001 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
MRPL3P09001 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MRPL3P09001 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL3P09001 AL137060.1-201ENST00000618151 2648 ntBASIC19.75■□□□□ 0.75
MRPL3P09001 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MRPL3P09001 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL3P09001 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 AC087742.1-201ENST00000575880 1738 ntBASIC19.75■□□□□ 0.75
MRPL3P09001 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
MRPL3P09001 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL3P09001 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.75■□□□□ 0.75
MRPL3P09001 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.75■□□□□ 0.75
MRPL3P09001 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL3P09001 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
MRPL3P09001 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
MRPL3P09001 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.74■□□□□ 0.75
MRPL3P09001 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL3P09001 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MRPL3P09001 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL3P09001 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL3P09001 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.73■□□□□ 0.75
MRPL3P09001 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 MIR4508-201ENST00000584178 70 ntBASIC19.73■□□□□ 0.75
MRPL3P09001 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL3P09001 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MRPL3P09001 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.72■□□□□ 0.75
MRPL3P09001 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.72■□□□□ 0.75
MRPL3P09001 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.72■□□□□ 0.75
MRPL3P09001 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.72■□□□□ 0.75
MRPL3P09001 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL3P09001 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.72■□□□□ 0.75
MRPL3P09001 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
MRPL3P09001 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MRPL3P09001 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MRPL3P09001 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.71■□□□□ 0.75
MRPL3P09001 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL3P09001 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL3P09001 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL3P09001 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL3P09001 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL3P09001 AC103834.1-201ENST00000520383 144 ntBASIC19.7■□□□□ 0.74
MRPL3P09001 AL033527.3-201ENST00000566366 1196 ntBASIC19.7■□□□□ 0.74
MRPL3P09001 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL3P09001 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL3P09001 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL3P09001 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL3P09001 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL3P09001 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL3P09001 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL3P09001 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL3P09001 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MRPL3P09001 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
MRPL3P09001 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
MRPL3P09001 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRPL3P09001 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.69■□□□□ 0.74
MRPL3P09001 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms