Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RB1P06400 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RB1P06400 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RB1P06400 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.61■■□□□ 1.37
RB1P06400 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RB1P06400 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RB1P06400 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.61■■□□□ 1.37
RB1P06400 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.61■■□□□ 1.37
RB1P06400 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RB1P06400 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.61■■□□□ 1.37
RB1P06400 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RB1P06400 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RB1P06400 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RB1P06400 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RB1P06400 AL355802.2-201ENST00000402069 882 ntBASIC23.6■■□□□ 1.37
RB1P06400 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.6■■□□□ 1.37
RB1P06400 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.6■■□□□ 1.37
RB1P06400 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RB1P06400 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.59■■□□□ 1.37
RB1P06400 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RB1P06400 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
RB1P06400 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.59■■□□□ 1.37
RB1P06400 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RB1P06400 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.59■■□□□ 1.37
RB1P06400 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RB1P06400 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RB1P06400 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RB1P06400 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.58■■□□□ 1.37
RB1P06400 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.58■■□□□ 1.37
RB1P06400 AC011767.1-201ENST00000617410 1153 ntBASIC23.58■■□□□ 1.37
RB1P06400 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RB1P06400 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RB1P06400 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RB1P06400 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RB1P06400 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
RB1P06400 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.57■■□□□ 1.36
RB1P06400 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.57■■□□□ 1.36
RB1P06400 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.57■■□□□ 1.36
RB1P06400 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.57■■□□□ 1.36
RB1P06400 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RB1P06400 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RB1P06400 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.57■■□□□ 1.36
RB1P06400 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RB1P06400 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RB1P06400 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.56■■□□□ 1.36
RB1P06400 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.56■■□□□ 1.36
RB1P06400 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.56■■□□□ 1.36
RB1P06400 TMEM191A-211ENST00000637163 1067 ntBASIC23.56■■□□□ 1.36
RB1P06400 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RB1P06400 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RB1P06400 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 GPX1P1-201ENST00000388829 606 ntBASIC23.55■■□□□ 1.36
RB1P06400 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 AC087239.1-201ENST00000622671 572 ntBASIC23.55■■□□□ 1.36
RB1P06400 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.55■■□□□ 1.36
RB1P06400 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.55■■□□□ 1.36
RB1P06400 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RB1P06400 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.54■■□□□ 1.36
RB1P06400 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 AC135731.1-201ENST00000569415 2548 ntBASIC23.54■■□□□ 1.36
RB1P06400 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RB1P06400 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.54■■□□□ 1.36
RB1P06400 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.54■■□□□ 1.36
RB1P06400 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.54■■□□□ 1.36
RB1P06400 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RB1P06400 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RB1P06400 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RB1P06400 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
RB1P06400 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RB1P06400 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RB1P06400 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.53■■□□□ 1.36
RB1P06400 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.53■■□□□ 1.36
RB1P06400 SMUG1P1-201ENST00000590640 811 ntBASIC23.53■■□□□ 1.36
RB1P06400 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.53■■□□□ 1.36
RB1P06400 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RB1P06400 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RB1P06400 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.53■■□□□ 1.36
RB1P06400 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RB1P06400 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RB1P06400 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RB1P06400 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RB1P06400 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.52■■□□□ 1.36
RB1P06400 AC010141.3-201ENST00000456659 717 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms