Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBP04114 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.02□□□□□ -0.17
APOBP04114 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.02□□□□□ -0.17
APOBP04114 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.02□□□□□ -0.17
APOBP04114 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOBP04114 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.02□□□□□ -0.17
APOBP04114 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
APOBP04114 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOBP04114 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
APOBP04114 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOBP04114 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 DUX4L16-201ENST00000555130 1264 ntBASIC14.01□□□□□ -0.17
APOBP04114 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOBP04114 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
APOBP04114 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14□□□□□ -0.17
APOBP04114 MARS-234ENST00000630571 216 ntTSL 5 BASIC14□□□□□ -0.17
APOBP04114 MARS-235ENST00000630803 183 ntTSL 3 BASIC14□□□□□ -0.17
APOBP04114 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBP04114 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC14□□□□□ -0.17
APOBP04114 ALDH1A3-203ENST00000557963 1670 ntBASIC14□□□□□ -0.17
APOBP04114 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOBP04114 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOBP04114 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBP04114 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
APOBP04114 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOBP04114 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOBP04114 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.99□□□□□ -0.17
APOBP04114 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.99□□□□□ -0.17
APOBP04114 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.99□□□□□ -0.17
APOBP04114 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
APOBP04114 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBP04114 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBP04114 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOBP04114 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.99□□□□□ -0.17
APOBP04114 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.99□□□□□ -0.17
APOBP04114 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.99□□□□□ -0.17
APOBP04114 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOBP04114 DUSP8P4-201ENST00000399538 1761 ntBASIC13.98□□□□□ -0.17
APOBP04114 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC13.98□□□□□ -0.17
APOBP04114 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBP04114 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
APOBP04114 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.98□□□□□ -0.17
APOBP04114 GCSHP5-201ENST00000443090 522 ntBASIC13.98□□□□□ -0.17
APOBP04114 AC231657.2-201ENST00000624556 255 ntBASIC13.98□□□□□ -0.17
APOBP04114 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBP04114 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOBP04114 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOBP04114 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.98□□□□□ -0.17
APOBP04114 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
APOBP04114 BX005040.4-201ENST00000637145 1518 ntBASIC13.98□□□□□ -0.17
APOBP04114 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBP04114 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.97□□□□□ -0.17
APOBP04114 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.97□□□□□ -0.17
APOBP04114 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBP04114 AL161729.1-201ENST00000604104 1402 ntBASIC13.97□□□□□ -0.17
APOBP04114 AC135731.1-201ENST00000569415 2548 ntBASIC13.97□□□□□ -0.17
APOBP04114 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.97□□□□□ -0.17
APOBP04114 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 TSPY6P-201ENST00000448518 926 ntBASIC13.97□□□□□ -0.17
APOBP04114 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.97□□□□□ -0.17
APOBP04114 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms