Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
MT-ND1P03886 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-ND1P03886 TSPY13P-201ENST00000338964 914 ntBASIC20.76■□□□□ 0.91
MT-ND1P03886 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-ND1P03886 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.76■□□□□ 0.91
MT-ND1P03886 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-ND1P03886 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
MT-ND1P03886 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND1P03886 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-ND1P03886 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND1P03886 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MT-ND1P03886 AC026310.3-201ENST00000625186 2373 ntBASIC20.75■□□□□ 0.91
MT-ND1P03886 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.75■□□□□ 0.91
MT-ND1P03886 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.75■□□□□ 0.91
MT-ND1P03886 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MT-ND1P03886 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.75■□□□□ 0.91
MT-ND1P03886 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 AC087742.1-201ENST00000575880 1738 ntBASIC20.75■□□□□ 0.91
MT-ND1P03886 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MT-ND1P03886 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND1P03886 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND1P03886 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.74■□□□□ 0.91
MT-ND1P03886 SLC25A24-204ENST00000569674 2357 ntBASIC20.74■□□□□ 0.91
MT-ND1P03886 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.74■□□□□ 0.91
MT-ND1P03886 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND1P03886 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND1P03886 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MT-ND1P03886 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.74■□□□□ 0.91
MT-ND1P03886 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND1P03886 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND1P03886 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.73■□□□□ 0.91
MT-ND1P03886 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MT-ND1P03886 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
MT-ND1P03886 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.73■□□□□ 0.91
MT-ND1P03886 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.73■□□□□ 0.91
MT-ND1P03886 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.73■□□□□ 0.91
MT-ND1P03886 AC120024.1-201ENST00000562672 995 ntBASIC20.73■□□□□ 0.91
MT-ND1P03886 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MT-ND1P03886 PVT1_1.1-201ENST00000615125 194 ntBASIC20.73■□□□□ 0.91
MT-ND1P03886 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
MT-ND1P03886 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND1P03886 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-ND1P03886 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
MT-ND1P03886 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-ND1P03886 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND1P03886 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND1P03886 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
MT-ND1P03886 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 KRT18P24-201ENST00000344739 1156 ntBASIC20.71■□□□□ 0.91
MT-ND1P03886 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND1P03886 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND1P03886 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
MT-ND1P03886 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
MT-ND1P03886 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MT-ND1P03886 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.7■□□□□ 0.9
MT-ND1P03886 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MT-ND1P03886 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 AC010980.1-201ENST00000587192 1142 ntBASIC20.7■□□□□ 0.9
MT-ND1P03886 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND1P03886 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MT-ND1P03886 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.7■□□□□ 0.9
MT-ND1P03886 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MT-ND1P03886 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.69■□□□□ 0.9
MT-ND1P03886 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.69■□□□□ 0.9
MT-ND1P03886 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.69■□□□□ 0.9
MT-ND1P03886 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 THA1P-201ENST00000590384 1145 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms