Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.32■■□□□ 1
KRT6AP02538 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KRT6AP02538 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT6AP02538 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KRT6AP02538 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.31■■□□□ 1
KRT6AP02538 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT6AP02538 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.31■■□□□ 1
KRT6AP02538 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT6AP02538 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT6AP02538 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT6AP02538 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
KRT6AP02538 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.31■■□□□ 1
KRT6AP02538 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.3■■□□□ 1
KRT6AP02538 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
KRT6AP02538 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.3■■□□□ 1
KRT6AP02538 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT6AP02538 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.29■■□□□ 1
KRT6AP02538 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.29■■□□□ 1
KRT6AP02538 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
KRT6AP02538 MIR6724-1-201ENST00000616420 92 ntBASIC21.29■■□□□ 1
KRT6AP02538 MIR6724-2-201ENST00000616483 92 ntBASIC21.29■■□□□ 1
KRT6AP02538 MIR6724-4-201ENST00000617390 92 ntBASIC21.29■■□□□ 1
KRT6AP02538 MIR6724-3-201ENST00000622482 92 ntBASIC21.29■■□□□ 1
KRT6AP02538 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.29■■□□□ 1
KRT6AP02538 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT6AP02538 C17orf82-201ENST00000623772 1530 ntBASIC21.29■■□□□ 1
KRT6AP02538 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.28■■□□□ 1
KRT6AP02538 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 AC087742.1-201ENST00000575880 1738 ntBASIC21.28■■□□□ 1
KRT6AP02538 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KRT6AP02538 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KRT6AP02538 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
KRT6AP02538 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.27■■□□□ 1
KRT6AP02538 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
KRT6AP02538 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.27■■□□□ 1
KRT6AP02538 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.27■■□□□ 1
KRT6AP02538 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRT6AP02538 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KRT6AP02538 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KRT6AP02538 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
KRT6AP02538 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KRT6AP02538 UNC93B8-201ENST00000511903 705 ntBASIC21.26■□□□□ 0.99
KRT6AP02538 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT6AP02538 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KRT6AP02538 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT6AP02538 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.26■□□□□ 0.99
KRT6AP02538 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
KRT6AP02538 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
KRT6AP02538 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KRT6AP02538 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
KRT6AP02538 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT6AP02538 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT6AP02538 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT6AP02538 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms