Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.59■■□□□ 1.69
ALDH1A1P00352 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ALDH1A1P00352 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
ALDH1A1P00352 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.58■■□□□ 1.69
ALDH1A1P00352 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.58■■□□□ 1.69
ALDH1A1P00352 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
ALDH1A1P00352 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.58■■□□□ 1.69
ALDH1A1P00352 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ALDH1A1P00352 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.58■■□□□ 1.68
ALDH1A1P00352 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ALDH1A1P00352 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ALDH1A1P00352 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ALDH1A1P00352 AC144652.1-201ENST00000609974 1624 ntBASIC25.57■■□□□ 1.68
ALDH1A1P00352 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ALDH1A1P00352 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 AC007322.1-201ENST00000426983 750 ntBASIC25.57■■□□□ 1.68
ALDH1A1P00352 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ALDH1A1P00352 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
ALDH1A1P00352 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ALDH1A1P00352 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ALDH1A1P00352 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ALDH1A1P00352 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
ALDH1A1P00352 AC005181.1-201ENST00000604782 1256 ntBASIC25.56■■□□□ 1.68
ALDH1A1P00352 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
ALDH1A1P00352 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
ALDH1A1P00352 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.55■■□□□ 1.68
ALDH1A1P00352 AL138781.1-201ENST00000566567 1274 ntBASIC25.55■■□□□ 1.68
ALDH1A1P00352 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.55■■□□□ 1.68
ALDH1A1P00352 AC133041.1-202ENST00000642053 222 ntBASIC25.55■■□□□ 1.68
ALDH1A1P00352 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.55■■□□□ 1.68
ALDH1A1P00352 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.55■■□□□ 1.68
ALDH1A1P00352 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ALDH1A1P00352 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ALDH1A1P00352 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ALDH1A1P00352 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ALDH1A1P00352 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ALDH1A1P00352 AC069152.1-201ENST00000438030 544 ntBASIC25.54■■□□□ 1.68
ALDH1A1P00352 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.54■■□□□ 1.68
ALDH1A1P00352 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.54■■□□□ 1.68
ALDH1A1P00352 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ALDH1A1P00352 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ALDH1A1P00352 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.53■■□□□ 1.68
ALDH1A1P00352 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.53■■□□□ 1.68
ALDH1A1P00352 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ALDH1A1P00352 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
ALDH1A1P00352 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ALDH1A1P00352 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ALDH1A1P00352 AC073210.2-201ENST00000430369 194 ntBASIC25.53■■□□□ 1.68
ALDH1A1P00352 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.53■■□□□ 1.68
ALDH1A1P00352 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.53■■□□□ 1.68
ALDH1A1P00352 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ALDH1A1P00352 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 DUX4L16-201ENST00000555130 1264 ntBASIC25.52■■□□□ 1.68
ALDH1A1P00352 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 SMUG1P1-201ENST00000590640 811 ntBASIC25.52■■□□□ 1.68
ALDH1A1P00352 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ALDH1A1P00352 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.52■■□□□ 1.68
ALDH1A1P00352 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ALDH1A1P00352 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ALDH1A1P00352 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ALDH1A1P00352 AC087239.1-201ENST00000622671 572 ntBASIC25.51■■□□□ 1.67
ALDH1A1P00352 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ALDH1A1P00352 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ALDH1A1P00352 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
ALDH1A1P00352 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ALDH1A1P00352 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms