Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF1O95521 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF1O95521 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.97■■□□□ 1.11
PRAMEF1O95521 AC136469.2-201ENST00000623944 1028 ntBASIC21.97■■□□□ 1.11
PRAMEF1O95521 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.97■■□□□ 1.11
PRAMEF1O95521 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
PRAMEF1O95521 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF1O95521 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF1O95521 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.97■■□□□ 1.11
PRAMEF1O95521 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF1O95521 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 AL136162.1-201ENST00000607711 1078 ntBASIC21.96■■□□□ 1.11
PRAMEF1O95521 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAMEF1O95521 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF1O95521 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PRAMEF1O95521 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
PRAMEF1O95521 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.95■■□□□ 1.1
PRAMEF1O95521 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.95■■□□□ 1.1
PRAMEF1O95521 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PRAMEF1O95521 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF1O95521 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 AC133561.1-201ENST00000568600 2415 ntBASIC21.94■■□□□ 1.1
PRAMEF1O95521 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 AC024257.2-201ENST00000549699 147 ntBASIC21.94■■□□□ 1.1
PRAMEF1O95521 AC135279.3-201ENST00000610945 1311 ntBASIC21.94■■□□□ 1.1
PRAMEF1O95521 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.94■■□□□ 1.1
PRAMEF1O95521 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF1O95521 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF1O95521 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF1O95521 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF1O95521 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
PRAMEF1O95521 AC110285.6-201ENST00000617652 491 ntBASIC21.93■■□□□ 1.1
PRAMEF1O95521 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF1O95521 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF1O95521 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF1O95521 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.92■■□□□ 1.1
PRAMEF1O95521 MIR4767-201ENST00000582827 78 ntBASIC21.92■■□□□ 1.1
PRAMEF1O95521 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.92■■□□□ 1.1
PRAMEF1O95521 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF1O95521 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF1O95521 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF1O95521 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF1O95521 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
PRAMEF1O95521 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF1O95521 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF1O95521 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PRAMEF1O95521 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF1O95521 OR2I1P-207ENST00000453522 948 ntBASIC21.9■■□□□ 1.1
PRAMEF1O95521 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PRAMEF1O95521 PBX2P1-201ENST00000493219 1291 ntBASIC21.9■■□□□ 1.1
PRAMEF1O95521 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF1O95521 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF1O95521 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF1O95521 LINC01960-201ENST00000563759 1884 ntBASIC21.9■■□□□ 1.1
PRAMEF1O95521 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF1O95521 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF1O95521 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms