Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
CLPXO76031 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.95■□□□□ 0.78
CLPXO76031 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLPXO76031 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLPXO76031 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.95■□□□□ 0.78
CLPXO76031 AC079630.1-202ENST00000618127 1840 ntBASIC19.95■□□□□ 0.78
CLPXO76031 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLPXO76031 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPXO76031 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPXO76031 AL161729.1-201ENST00000604104 1402 ntBASIC19.94■□□□□ 0.78
CLPXO76031 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPXO76031 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPXO76031 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPXO76031 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPXO76031 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLPXO76031 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPXO76031 U85056.1-201ENST00000616429 682 ntBASIC19.94■□□□□ 0.78
CLPXO76031 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLPXO76031 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLPXO76031 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLPXO76031 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLPXO76031 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLPXO76031 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CLPXO76031 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPXO76031 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPXO76031 AL391422.3-201ENST00000603791 2761 ntBASIC19.93■□□□□ 0.78
CLPXO76031 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLPXO76031 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLPXO76031 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.92■□□□□ 0.78
CLPXO76031 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CLPXO76031 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
CLPXO76031 AC093536.1-201ENST00000569153 554 ntBASIC19.92■□□□□ 0.78
CLPXO76031 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.92■□□□□ 0.78
CLPXO76031 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.92■□□□□ 0.78
CLPXO76031 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPXO76031 AL157384.1-201ENST00000445995 2473 ntBASIC19.92■□□□□ 0.78
CLPXO76031 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.92■□□□□ 0.78
CLPXO76031 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLPXO76031 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLPXO76031 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLPXO76031 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLPXO76031 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPXO76031 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
CLPXO76031 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CLPXO76031 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPXO76031 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPXO76031 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPXO76031 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPXO76031 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
CLPXO76031 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPXO76031 AL033527.3-201ENST00000566366 1196 ntBASIC19.9■□□□□ 0.78
CLPXO76031 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPXO76031 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPXO76031 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.9■□□□□ 0.78
CLPXO76031 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPXO76031 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLPXO76031 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLPXO76031 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CLPXO76031 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLPXO76031 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.89■□□□□ 0.77
CLPXO76031 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLPXO76031 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPXO76031 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms