Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC233992.3-201ENST00000607491 485 ntBASIC21.23■□□□□ 0.99
SNRNP200O75643 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNRNP200O75643 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
SNRNP200O75643 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
SNRNP200O75643 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNRNP200O75643 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNRNP200O75643 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SNRNP200O75643 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SNRNP200O75643 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNRNP200O75643 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.22■□□□□ 0.99
SNRNP200O75643 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNRNP200O75643 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SNRNP200O75643 CA15P2-201ENST00000611168 834 ntBASIC21.22■□□□□ 0.99
SNRNP200O75643 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNRNP200O75643 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNRNP200O75643 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.22■□□□□ 0.99
SNRNP200O75643 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNRNP200O75643 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.22■□□□□ 0.99
SNRNP200O75643 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
SNRNP200O75643 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNRNP200O75643 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.21■□□□□ 0.99
SNRNP200O75643 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.21■□□□□ 0.99
SNRNP200O75643 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.21■□□□□ 0.99
SNRNP200O75643 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.21■□□□□ 0.99
SNRNP200O75643 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNRNP200O75643 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
SNRNP200O75643 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SNRNP200O75643 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.2■□□□□ 0.98
SNRNP200O75643 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNRNP200O75643 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SNRNP200O75643 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.2■□□□□ 0.98
SNRNP200O75643 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNRNP200O75643 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.2■□□□□ 0.98
SNRNP200O75643 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
SNRNP200O75643 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.2■□□□□ 0.98
SNRNP200O75643 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNRNP200O75643 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SNRNP200O75643 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.2■□□□□ 0.98
SNRNP200O75643 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 AC126544.1-201ENST00000580842 1059 ntBASIC21.19■□□□□ 0.98
SNRNP200O75643 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.19■□□□□ 0.98
SNRNP200O75643 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SNRNP200O75643 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.19■□□□□ 0.98
SNRNP200O75643 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNRNP200O75643 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SNRNP200O75643 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNRNP200O75643 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNRNP200O75643 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.18■□□□□ 0.98
SNRNP200O75643 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SNRNP200O75643 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.18■□□□□ 0.98
SNRNP200O75643 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.18■□□□□ 0.98
SNRNP200O75643 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SNRNP200O75643 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP200O75643 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP200O75643 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.17■□□□□ 0.98
SNRNP200O75643 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNRNP200O75643 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.17■□□□□ 0.98
SNRNP200O75643 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP200O75643 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP200O75643 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP200O75643 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SNRNP200O75643 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.16■□□□□ 0.98
SNRNP200O75643 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.16■□□□□ 0.98
SNRNP200O75643 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SNRNP200O75643 AC026271.2-201ENST00000428091 497 ntBASIC21.16■□□□□ 0.98
SNRNP200O75643 AC091305.1-201ENST00000479476 895 ntBASIC21.16■□□□□ 0.98
SNRNP200O75643 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.16■□□□□ 0.98
SNRNP200O75643 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.16■□□□□ 0.98
SNRNP200O75643 RARRES2P6-201ENST00000567333 442 ntBASIC21.16■□□□□ 0.98
SNRNP200O75643 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP200O75643 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SNRNP200O75643 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
SNRNP200O75643 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP200O75643 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP200O75643 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP200O75643 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SNRNP200O75643 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.16■□□□□ 0.98
SNRNP200O75643 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.16■□□□□ 0.98
SNRNP200O75643 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
SNRNP200O75643 AC012414.1-201ENST00000556676 535 ntBASIC21.16■□□□□ 0.98
SNRNP200O75643 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.16■□□□□ 0.98
SNRNP200O75643 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP200O75643 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNRNP200O75643 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP200O75643 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP200O75643 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms