Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPM3O75607 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.32■■□□□ 1.8
NPM3O75607 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.32■■□□□ 1.8
NPM3O75607 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.32■■□□□ 1.8
NPM3O75607 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPM3O75607 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPM3O75607 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NPM3O75607 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NPM3O75607 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NPM3O75607 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NPM3O75607 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.31■■□□□ 1.8
NPM3O75607 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.31■■□□□ 1.8
NPM3O75607 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
NPM3O75607 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.31■■□□□ 1.8
NPM3O75607 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 AC105233.4-201ENST00000642045 216 ntBASIC26.31■■□□□ 1.8
NPM3O75607 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPM3O75607 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NPM3O75607 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NPM3O75607 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPM3O75607 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
NPM3O75607 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
NPM3O75607 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.3■■□□□ 1.8
NPM3O75607 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC26.3■■□□□ 1.8
NPM3O75607 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.3■■□□□ 1.8
NPM3O75607 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC26.3■■□□□ 1.8
NPM3O75607 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPM3O75607 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.3■■□□□ 1.8
NPM3O75607 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.29■■□□□ 1.8
NPM3O75607 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.29■■□□□ 1.8
NPM3O75607 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.29■■□□□ 1.8
NPM3O75607 AP000240.1-201ENST00000609910 452 ntBASIC26.29■■□□□ 1.8
NPM3O75607 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.29■■□□□ 1.8
NPM3O75607 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
NPM3O75607 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPM3O75607 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.28■■□□□ 1.8
NPM3O75607 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.28■■□□□ 1.8
NPM3O75607 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NPM3O75607 KRT18P14-201ENST00000534205 1250 ntBASIC26.28■■□□□ 1.8
NPM3O75607 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.28■■□□□ 1.8
NPM3O75607 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.28■■□□□ 1.8
NPM3O75607 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.28■■□□□ 1.8
NPM3O75607 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NPM3O75607 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPM3O75607 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPM3O75607 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NPM3O75607 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.27■■□□□ 1.8
NPM3O75607 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NPM3O75607 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.27■■□□□ 1.8
NPM3O75607 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
NPM3O75607 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC26.27■■□□□ 1.8
NPM3O75607 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.27■■□□□ 1.8
NPM3O75607 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NPM3O75607 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.27■■□□□ 1.8
NPM3O75607 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPM3O75607 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPM3O75607 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.26■■□□□ 1.79
NPM3O75607 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
NPM3O75607 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.26■■□□□ 1.79
NPM3O75607 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
NPM3O75607 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
NPM3O75607 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.26■■□□□ 1.79
NPM3O75607 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.26■■□□□ 1.79
NPM3O75607 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.26■■□□□ 1.79
NPM3O75607 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
NPM3O75607 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPM3O75607 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.26■■□□□ 1.79
NPM3O75607 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
NPM3O75607 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NPM3O75607 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
NPM3O75607 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NPM3O75607 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NPM3O75607 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC26.25■■□□□ 1.79
NPM3O75607 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.25■■□□□ 1.79
NPM3O75607 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NPM3O75607 AC137695.1-201ENST00000604126 489 ntBASIC26.25■■□□□ 1.79
NPM3O75607 AC092437.1-201ENST00000624794 1048 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms