Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM3O75382 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
TRIM3O75382 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM3O75382 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM3O75382 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM3O75382 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM3O75382 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 AC011298.3-201ENST00000615796 283 ntBASIC20.44■□□□□ 0.86
TRIM3O75382 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 FP325331.1-202ENST00000623531 1380 ntBASIC20.44■□□□□ 0.86
TRIM3O75382 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM3O75382 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRIM3O75382 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM3O75382 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.43■□□□□ 0.86
TRIM3O75382 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM3O75382 MIR3181-201ENST00000578512 73 ntBASIC20.43■□□□□ 0.86
TRIM3O75382 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM3O75382 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM3O75382 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM3O75382 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.43■□□□□ 0.86
TRIM3O75382 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM3O75382 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 EDA-201ENST00000338901 1233 ntBASIC20.42■□□□□ 0.86
TRIM3O75382 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM3O75382 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM3O75382 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM3O75382 AL031432.3-201ENST00000607698 485 ntBASIC20.42■□□□□ 0.86
TRIM3O75382 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM3O75382 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM3O75382 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM3O75382 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM3O75382 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM3O75382 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM3O75382 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM3O75382 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM3O75382 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM3O75382 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM3O75382 AC144652.1-201ENST00000609974 1624 ntBASIC20.41■□□□□ 0.86
TRIM3O75382 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM3O75382 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM3O75382 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TRIM3O75382 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM3O75382 MIR4767-201ENST00000582827 78 ntBASIC20.4■□□□□ 0.86
TRIM3O75382 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM3O75382 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM3O75382 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM3O75382 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRIM3O75382 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM3O75382 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM3O75382 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM3O75382 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
TRIM3O75382 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM3O75382 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM3O75382 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
TRIM3O75382 DUX4L4-201ENST00000566884 1269 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 pRNA.6-201ENST00000610482 90 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 pRNA.5-201ENST00000612139 90 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 pRNA.11-201ENST00000618423 90 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 pRNA.13-201ENST00000619112 90 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 AL355001.2-201ENST00000620617 1191 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms