Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.76■■□□□ 1.07
IFRD1O00458 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
IFRD1O00458 AC135279.3-201ENST00000610945 1311 ntBASIC21.76■■□□□ 1.07
IFRD1O00458 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
IFRD1O00458 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.75■■□□□ 1.07
IFRD1O00458 AC011298.3-201ENST00000615796 283 ntBASIC21.75■■□□□ 1.07
IFRD1O00458 AC110285.6-201ENST00000617652 491 ntBASIC21.75■■□□□ 1.07
IFRD1O00458 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.75■■□□□ 1.07
IFRD1O00458 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
IFRD1O00458 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
IFRD1O00458 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
IFRD1O00458 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IFRD1O00458 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.74■■□□□ 1.07
IFRD1O00458 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
IFRD1O00458 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
IFRD1O00458 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.74■■□□□ 1.07
IFRD1O00458 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.74■■□□□ 1.07
IFRD1O00458 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.74■■□□□ 1.07
IFRD1O00458 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.74■■□□□ 1.07
IFRD1O00458 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
IFRD1O00458 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFRD1O00458 AC233723.2-201ENST00000623798 2106 ntBASIC21.74■■□□□ 1.07
IFRD1O00458 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.73■■□□□ 1.07
IFRD1O00458 AC024257.2-201ENST00000549699 147 ntBASIC21.73■■□□□ 1.07
IFRD1O00458 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFRD1O00458 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.72■■□□□ 1.07
IFRD1O00458 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.72■■□□□ 1.07
IFRD1O00458 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.72■■□□□ 1.07
IFRD1O00458 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.72■■□□□ 1.07
IFRD1O00458 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.72■■□□□ 1.07
IFRD1O00458 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 AL499627.2-201ENST00000606283 725 ntBASIC21.72■■□□□ 1.07
IFRD1O00458 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
IFRD1O00458 AC106739.1-201ENST00000617035 715 ntBASIC21.72■■□□□ 1.07
IFRD1O00458 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
IFRD1O00458 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFRD1O00458 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.71■■□□□ 1.07
IFRD1O00458 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IFRD1O00458 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.71■■□□□ 1.07
IFRD1O00458 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IFRD1O00458 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.71■■□□□ 1.07
IFRD1O00458 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.71■■□□□ 1.07
IFRD1O00458 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.71■■□□□ 1.07
IFRD1O00458 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IFRD1O00458 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.71■■□□□ 1.07
IFRD1O00458 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 AC136469.2-201ENST00000623944 1028 ntBASIC21.7■■□□□ 1.06
IFRD1O00458 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IFRD1O00458 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.7■■□□□ 1.06
IFRD1O00458 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.06
IFRD1O00458 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
IFRD1O00458 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IFRD1O00458 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IFRD1O00458 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IFRD1O00458 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
IFRD1O00458 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
IFRD1O00458 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IFRD1O00458 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
IFRD1O00458 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.69■■□□□ 1.06
IFRD1O00458 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms