Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXE1O00358 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXE1O00358 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXE1O00358 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXE1O00358 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXE1O00358 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXE1O00358 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXE1O00358 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
FOXE1O00358 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXE1O00358 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXE1O00358 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXE1O00358 LINC01960-201ENST00000563759 1884 ntBASIC21.08■□□□□ 0.97
FOXE1O00358 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXE1O00358 AC092171.4-201ENST00000609130 632 ntBASIC21.08■□□□□ 0.97
FOXE1O00358 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXE1O00358 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXE1O00358 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.08■□□□□ 0.96
FOXE1O00358 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
FOXE1O00358 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXE1O00358 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXE1O00358 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXE1O00358 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXE1O00358 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXE1O00358 AC006455.2-201ENST00000429931 906 ntBASIC21.07■□□□□ 0.96
FOXE1O00358 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXE1O00358 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXE1O00358 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
FOXE1O00358 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXE1O00358 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
FOXE1O00358 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXE1O00358 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXE1O00358 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FOXE1O00358 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXE1O00358 AC133637.1-201ENST00000624115 1537 ntBASIC21.05■□□□□ 0.96
FOXE1O00358 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FOXE1O00358 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXE1O00358 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXE1O00358 pRNA.6-201ENST00000610482 90 ntBASIC21.05■□□□□ 0.96
FOXE1O00358 pRNA.5-201ENST00000612139 90 ntBASIC21.05■□□□□ 0.96
FOXE1O00358 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 pRNA.11-201ENST00000618423 90 ntBASIC21.05■□□□□ 0.96
FOXE1O00358 pRNA.13-201ENST00000619112 90 ntBASIC21.05■□□□□ 0.96
FOXE1O00358 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXE1O00358 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
FOXE1O00358 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXE1O00358 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXE1O00358 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXE1O00358 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXE1O00358 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 LINC00526-201ENST00000581067 1875 ntBASIC21.04■□□□□ 0.96
FOXE1O00358 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXE1O00358 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
FOXE1O00358 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXE1O00358 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
FOXE1O00358 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
FOXE1O00358 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXE1O00358 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 MIR3181-201ENST00000578512 73 ntBASIC21.03■□□□□ 0.96
FOXE1O00358 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.03■□□□□ 0.96
FOXE1O00358 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXE1O00358 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXE1O00358 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXE1O00358 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXE1O00358 MIR4466-201ENST00000606121 54 ntBASIC21.02■□□□□ 0.96
FOXE1O00358 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXE1O00358 CA15P2-201ENST00000611168 834 ntBASIC21.02■□□□□ 0.96
FOXE1O00358 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.02■□□□□ 0.96
FOXE1O00358 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXE1O00358 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXE1O00358 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXE1O00358 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms