Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
H3BM21 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3BM21 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
H3BM21 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
H3BM21 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.93■■□□□ 1.1
H3BM21 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
H3BM21 AL162430.1-201ENST00000480705 870 ntBASIC21.93■■□□□ 1.1
H3BM21 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.93■■□□□ 1.1
H3BM21 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.93■■□□□ 1.1
H3BM21 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.93■■□□□ 1.1
H3BM21 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H3BM21 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.92■■□□□ 1.1
H3BM21 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
H3BM21 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.92■■□□□ 1.1
H3BM21 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.92■■□□□ 1.1
H3BM21 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H3BM21 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
H3BM21 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
H3BM21 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.92■■□□□ 1.1
H3BM21 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H3BM21 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H3BM21 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
H3BM21 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.91■■□□□ 1.1
H3BM21 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
H3BM21 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.91■■□□□ 1.1
H3BM21 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
H3BM21 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.91■■□□□ 1.1
H3BM21 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
H3BM21 LINC01529-204ENST00000636474 1715 ntBASIC21.91■■□□□ 1.1
H3BM21 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.91■■□□□ 1.1
H3BM21 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
H3BM21 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
H3BM21 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.9■■□□□ 1.1
H3BM21 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 OR2I1P-207ENST00000453522 948 ntBASIC21.9■■□□□ 1.1
H3BM21 AL358852.1-201ENST00000623174 1268 ntBASIC21.9■■□□□ 1.1
H3BM21 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.9■■□□□ 1.1
H3BM21 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.9■■□□□ 1.1
H3BM21 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3BM21 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
H3BM21 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
H3BM21 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H3BM21 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
H3BM21 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.89■■□□□ 1.09
H3BM21 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.89■■□□□ 1.09
H3BM21 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
H3BM21 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.89■■□□□ 1.09
H3BM21 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
H3BM21 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
H3BM21 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
H3BM21 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 AL353803.4-201ENST00000565882 1934 ntBASIC21.88■■□□□ 1.09
H3BM21 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.88■■□□□ 1.09
H3BM21 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.88■■□□□ 1.09
H3BM21 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.88■■□□□ 1.09
H3BM21 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 YBX1P1-201ENST00000445822 960 ntBASIC21.88■■□□□ 1.09
H3BM21 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
H3BM21 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
H3BM21 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H3BM21 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.87■■□□□ 1.09
H3BM21 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
H3BM21 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
H3BM21 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 MIR572-201ENST00000384983 95 ntBASIC21.87■■□□□ 1.09
H3BM21 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 AC034268.1-201ENST00000441047 882 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms