Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.6■□□□□ 0.73
NPIPB4C9JG80 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 SRD5A1P1-201ENST00000442297 786 ntBASIC19.59■□□□□ 0.73
NPIPB4C9JG80 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPB4C9JG80 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPIPB4C9JG80 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPIPB4C9JG80 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.58■□□□□ 0.73
NPIPB4C9JG80 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.58■□□□□ 0.73
NPIPB4C9JG80 AC139530.1-201ENST00000575312 1977 ntBASIC19.58■□□□□ 0.73
NPIPB4C9JG80 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPB4C9JG80 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 AC133637.1-201ENST00000624115 1537 ntBASIC19.57■□□□□ 0.72
NPIPB4C9JG80 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 AC099791.2-201ENST00000605725 427 ntBASIC19.57■□□□□ 0.72
NPIPB4C9JG80 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
NPIPB4C9JG80 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 AC006455.2-201ENST00000429931 906 ntBASIC19.56■□□□□ 0.72
NPIPB4C9JG80 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 pRNA.6-201ENST00000610482 90 ntBASIC19.56■□□□□ 0.72
NPIPB4C9JG80 pRNA.5-201ENST00000612139 90 ntBASIC19.56■□□□□ 0.72
NPIPB4C9JG80 pRNA.11-201ENST00000618423 90 ntBASIC19.56■□□□□ 0.72
NPIPB4C9JG80 pRNA.13-201ENST00000619112 90 ntBASIC19.56■□□□□ 0.72
NPIPB4C9JG80 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB4C9JG80 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 AL031602.1-201ENST00000633169 911 ntBASIC19.55■□□□□ 0.72
NPIPB4C9JG80 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB4C9JG80 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 AC092053.2-201ENST00000640557 1818 ntBASIC19.54■□□□□ 0.72
NPIPB4C9JG80 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
NPIPB4C9JG80 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB4C9JG80 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms