Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 GCSHP5-201ENST00000443090 522 ntBASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
TMEM88BA6NKF7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.14■■□□□ 1.77
TMEM88BA6NKF7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.14■■□□□ 1.77
TMEM88BA6NKF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 AC133552.2-202ENST00000575694 574 ntBASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEM88BA6NKF7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 RPS2P4-201ENST00000476944 856 ntBASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 MIR4758-201ENST00000577688 71 ntBASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM88BA6NKF7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 SLC7A5P1-201ENST00000568957 537 ntBASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM88BA6NKF7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.1■■□□□ 1.77
TMEM88BA6NKF7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 UBE2DNL-204ENST00000602536 740 ntBASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM88BA6NKF7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 AC104187.1-201ENST00000607510 612 ntBASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.08■■□□□ 1.77
TMEM88BA6NKF7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM88BA6NKF7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM88BA6NKF7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM88BA6NKF7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms