Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.88■□□□□ 0.61
MEIS3P1A6NDR6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 MIR6765-201ENST00000614092 87 ntBASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MEIS3P1A6NDR6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MEIS3P1A6NDR6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 DUX4L9-201ENST00000449051 1259 ntBASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.85■□□□□ 0.61
MEIS3P1A6NDR6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 AC087742.1-201ENST00000575880 1738 ntBASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 AC011551.1-201ENST00000614101 683 ntBASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 FAM99A-202ENST00000538190 1989 ntBASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MEIS3P1A6NDR6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.83■□□□□ 0.61
MEIS3P1A6NDR6 LONRF2P2-201ENST00000439212 571 ntBASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.6
MEIS3P1A6NDR6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.82■□□□□ 0.6
MEIS3P1A6NDR6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms