Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 LINC01124-201ENST00000409786 2117 ntBASIC19.6■□□□□ 0.73
NKX2-6A6NCS4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-6A6NCS4 OR2I1P-207ENST00000453522 948 ntBASIC19.6■□□□□ 0.73
NKX2-6A6NCS4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
NKX2-6A6NCS4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-6A6NCS4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 LINC02228-203ENST00000641970 1355 ntBASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 TERF1P2-201ENST00000583350 1212 ntBASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-6A6NCS4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.58■□□□□ 0.73
NKX2-6A6NCS4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.58■□□□□ 0.73
NKX2-6A6NCS4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX2-6A6NCS4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-6A6NCS4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-6A6NCS4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 ID1-201ENST00000376105 1233 ntBASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 DUX4L4-201ENST00000566884 1269 ntBASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 AP003733.4-201ENST00000623785 1697 ntBASIC19.56■□□□□ 0.72
NKX2-6A6NCS4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX2-6A6NCS4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms