Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.41■□□□□ 0.86
SH3D21A4FU49 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SH3D21A4FU49 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SH3D21A4FU49 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3D21A4FU49 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3D21A4FU49 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.41■□□□□ 0.86
SH3D21A4FU49 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3D21A4FU49 MIR935-201ENST00000401179 91 ntBASIC20.4■□□□□ 0.86
SH3D21A4FU49 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3D21A4FU49 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3D21A4FU49 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3D21A4FU49 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SH3D21A4FU49 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3D21A4FU49 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3D21A4FU49 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3D21A4FU49 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SH3D21A4FU49 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3D21A4FU49 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3D21A4FU49 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3D21A4FU49 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3D21A4FU49 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3D21A4FU49 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3D21A4FU49 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3D21A4FU49 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3D21A4FU49 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SH3D21A4FU49 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3D21A4FU49 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3D21A4FU49 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3D21A4FU49 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3D21A4FU49 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3D21A4FU49 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3D21A4FU49 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 MIR4466-201ENST00000606121 54 ntBASIC20.37■□□□□ 0.85
SH3D21A4FU49 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3D21A4FU49 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3D21A4FU49 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3D21A4FU49 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3D21A4FU49 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3D21A4FU49 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3D21A4FU49 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3D21A4FU49 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.36■□□□□ 0.85
SH3D21A4FU49 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3D21A4FU49 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3D21A4FU49 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3D21A4FU49 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SH3D21A4FU49 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SH3D21A4FU49 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
SH3D21A4FU49 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3D21A4FU49 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3D21A4FU49 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SH3D21A4FU49 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3D21A4FU49 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3D21A4FU49 ALDH1A3-203ENST00000557963 1670 ntBASIC20.35■□□□□ 0.85
SH3D21A4FU49 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms