Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.95■■■□□ 2.87
HFM1A2PYH4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.87
HFM1A2PYH4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC32.95■■■□□ 2.87
HFM1A2PYH4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 MIR572-201ENST00000384983 95 ntBASIC32.94■■■□□ 2.86
HFM1A2PYH4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC32.94■■■□□ 2.86
HFM1A2PYH4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
HFM1A2PYH4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC32.94■■■□□ 2.86
HFM1A2PYH4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
HFM1A2PYH4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
HFM1A2PYH4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
HFM1A2PYH4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.93■■■□□ 2.86
HFM1A2PYH4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.93■■■□□ 2.86
HFM1A2PYH4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
HFM1A2PYH4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HFM1A2PYH4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
HFM1A2PYH4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HFM1A2PYH4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HFM1A2PYH4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
HFM1A2PYH4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC32.91■■■□□ 2.86
HFM1A2PYH4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
HFM1A2PYH4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.91■■■□□ 2.86
HFM1A2PYH4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.91■■■□□ 2.86
HFM1A2PYH4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC32.91■■■□□ 2.86
HFM1A2PYH4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HFM1A2PYH4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC32.9■■■□□ 2.86
HFM1A2PYH4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
HFM1A2PYH4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HFM1A2PYH4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC32.9■■■□□ 2.86
HFM1A2PYH4 AC012414.1-201ENST00000556676 535 ntBASIC32.9■■■□□ 2.86
HFM1A2PYH4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
HFM1A2PYH4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
HFM1A2PYH4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
HFM1A2PYH4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
HFM1A2PYH4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC32.89■■■□□ 2.86
HFM1A2PYH4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
HFM1A2PYH4 AC027612.3-201ENST00000413684 1047 ntBASIC32.89■■■□□ 2.86
HFM1A2PYH4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HFM1A2PYH4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC32.89■■■□□ 2.86
HFM1A2PYH4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HFM1A2PYH4 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.88■■■□□ 2.85
HFM1A2PYH4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
HFM1A2PYH4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC32.88■■■□□ 2.85
HFM1A2PYH4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC32.88■■■□□ 2.85
HFM1A2PYH4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
HFM1A2PYH4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HFM1A2PYH4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HFM1A2PYH4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
HFM1A2PYH4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 AC092666.2-201ENST00000613287 246 ntBASIC32.87■■■□□ 2.85
HFM1A2PYH4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 AC068587.7-201ENST00000641602 218 ntBASIC32.87■■■□□ 2.85
HFM1A2PYH4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HFM1A2PYH4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC32.87■■■□□ 2.85
HFM1A2PYH4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HFM1A2PYH4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
HFM1A2PYH4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.86■■■□□ 2.85
HFM1A2PYH4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC32.86■■■□□ 2.85
HFM1A2PYH4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC32.86■■■□□ 2.85
HFM1A2PYH4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
HFM1A2PYH4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
HFM1A2PYH4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
HFM1A2PYH4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
HFM1A2PYH4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
HFM1A2PYH4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
HFM1A2PYH4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 AC097381.1-201ENST00000429019 1296 ntBASIC32.85■■■□□ 2.85
HFM1A2PYH4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC32.85■■■□□ 2.85
HFM1A2PYH4 MIR6821-201ENST00000617625 74 ntBASIC32.85■■■□□ 2.85
HFM1A2PYH4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HFM1A2PYH4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC32.84■■■□□ 2.85
HFM1A2PYH4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HFM1A2PYH4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HFM1A2PYH4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HFM1A2PYH4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms