Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV4S1A1TA0A5B7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 EP400NL-214ENST00000641289 2402 ntBASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV4S1A1TA0A5B7 GUSBP5-202ENST00000510805 1989 ntBASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC241377.3-202ENST00000626088 1088 ntBASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC241585.3-202ENST00000628937 1088 ntBASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC245100.8-202ENST00000629247 1058 ntBASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SERBP1P1-201ENST00000396021 1160 ntBASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SUDS3P1-201ENST00000505831 966 ntBASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 LINC00526-201ENST00000581067 1875 ntBASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 C17orf82-201ENST00000623772 1530 ntBASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV4S1A1TA0A5B7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms