Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 AC010542.4-201ENST00000563151 1910 ntBASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 FAM99A-202ENST00000538190 1989 ntBASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV27A0A0K0K1C4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.58■□□□□ 0.09
TRBV27A0A0K0K1C4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV27A0A0K0K1C4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 KRT18P24-201ENST00000344739 1156 ntBASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV27A0A0K0K1C4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 MIR4281-201ENST00000580852 62 ntBASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV27A0A0K0K1C4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 LINC01529-204ENST00000636474 1715 ntBASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 AC139795.1-202ENST00000500444 432 ntBASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV27A0A0K0K1C4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 THA1P-201ENST00000590384 1145 ntBASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms