Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 AC099791.1-201ENST00000416440 715 ntBASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 MIR3181-201ENST00000578512 73 ntBASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 AC006455.2-201ENST00000429931 906 ntBASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TRAV20A0A0B4J274 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 AP003733.4-201ENST00000623785 1697 ntBASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 BX842568.3-201ENST00000418104 571 ntBASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 AC233992.3-201ENST00000607491 485 ntBASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV20A0A0B4J274 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 IRS3P-201ENST00000223076 1006 ntBASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV20A0A0B4J274 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV20A0A0B4J274 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV20A0A0B4J274 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 AC141586.4-201ENST00000624558 1573 ntBASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
TRAV20A0A0B4J274 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 MIR6821-201ENST00000617625 74 ntBASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV20A0A0B4J274 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 PKD1P6-201ENST00000343738 4769 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 AC104564.3-201ENST00000582367 638 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms