Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC103834.1-201ENST00000520383 144 ntBASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC012354.3-201ENST00000623734 483 ntBASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-7A0A0A0MS04 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV6-7A0A0A0MS04 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-7A0A0A0MS04 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRBV6-7A0A0A0MS04 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC103724.3-201ENST00000564481 992 ntBASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC137630.3-201ENST00000607245 391 ntBASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC026310.3-201ENST00000625186 2373 ntBASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-7A0A0A0MS04 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 AC073130.3-201ENST00000624389 2278 ntBASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-7A0A0A0MS04 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 YBX1P4-201ENST00000392794 808 ntBASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms