Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
O00370 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.14□□□□□ -0.15
O00370 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC14.14□□□□□ -0.15
O00370 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
O00370 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
O00370 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
O00370 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.13□□□□□ -0.15
O00370 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
O00370 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 KRT18P46-201ENST00000435568 1279 ntBASIC14.13□□□□□ -0.15
O00370 RN7SL396P-201ENST00000471086 295 ntBASIC14.13□□□□□ -0.15
O00370 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 CXXC1P1-202ENST00000489409 1212 ntBASIC14.13□□□□□ -0.15
O00370 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 IGHVII-33-1-201ENST00000524010 280 ntBASIC14.13□□□□□ -0.15
O00370 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.13□□□□□ -0.15
O00370 GOLGA2P7-209ENST00000560408 745 ntBASIC14.13□□□□□ -0.15
O00370 AC141586.1-203ENST00000567242 366 ntBASIC14.13□□□□□ -0.15
O00370 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.13□□□□□ -0.15
O00370 AC006483.2-201ENST00000609813 515 ntBASIC14.13□□□□□ -0.15
O00370 AC005274.1-201ENST00000623460 802 ntBASIC14.13□□□□□ -0.15
O00370 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.13□□□□□ -0.15
O00370 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
O00370 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
O00370 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
O00370 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14.13□□□□□ -0.15
O00370 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 AC091181.1-201ENST00000623762 2098 ntBASIC14.13□□□□□ -0.15
O00370 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
O00370 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
O00370 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.12□□□□□ -0.15
O00370 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
O00370 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 AOC4P-203ENST00000566825 2289 ntBASIC14.12□□□□□ -0.15
O00370 AC073862.3-201ENST00000624597 1648 ntBASIC14.12□□□□□ -0.15
O00370 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
O00370 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
O00370 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.12□□□□□ -0.15
O00370 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
O00370 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
O00370 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 OR2T32P-201ENST00000403423 963 ntBASIC14.12□□□□□ -0.15
O00370 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
O00370 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.12□□□□□ -0.15
O00370 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 AC114781.1-201ENST00000450559 1028 ntBASIC14.12□□□□□ -0.15
O00370 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 AC026410.1-201ENST00000507366 1101 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms