Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 EIF5AP2-201ENST00000585668 1047 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 BX322534.1-201ENST00000635574 241 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC215524.1-201ENST00000635696 241 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LILRP2-202ENST00000413572 1383 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 CICP9-201ENST00000444451 1913 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC004241.5-201ENST00000623870 2448 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 SNORA47-201ENST00000458862 138 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 RPL29P2-201ENST00000488409 460 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 OR4A49P-201ENST00000527050 632 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC004801.1-201ENST00000549557 360 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC010202.1-201ENST00000551181 405 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 RN7SL121P-201ENST00000584223 273 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 AC007336.3-201ENST00000623886 2160 ntBASIC12.11□□□□□ -0.47
NPIPA3F8WFD2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms