Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KCNK16-203ENST00000425054 1272 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 UQCRFS1P2-201ENST00000426701 722 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC079804.3-201ENST00000508367 1000 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC022239.3-201ENST00000528629 544 ntTSL 4 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC092723.2-201ENST00000624955 793 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC008993.1-201ENST00000632280 776 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 GOLGA8DP-202ENST00000341390 2184 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PGAM1P4-201ENST00000397343 750 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC245128.2-201ENST00000412970 284 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AL133163.1-201ENST00000459899 949 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PCDHA6-201ENST00000378126 3267 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL513366.1-201ENST00000456427 1248 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 BMS1P4-201ENST00000441263 1332 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 MAX-212ENST00000555932 1673 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 USP4-204ENST00000416417 1536 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 FP885919.1-201ENST00000331259 1038 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PPIL3-204ENST00000409361 897 ntTSL 3 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PGC-204ENST00000425343 1152 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 GFRA2-203ENST00000517892 1176 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC023078.7-201ENST00000532712 961 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC067969.1-201ENST00000595853 552 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 CRISP2-203ENST00000618917 1492 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 ALG1L10P-201ENST00000437882 424 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC022296.3-201ENST00000608823 403 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 FAM74A7-201ENST00000613652 727 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AC092295.2-201ENST00000592087 1392 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 AL132639.2-201ENST00000605298 1359 ntBASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms