Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HNRNPA1P10-201ENST00000444945 962 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC11.88□□□□□ -0.51
ZIC3O60481 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC11.88□□□□□ -0.51
ZIC3O60481 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 GOLGA2P10-201ENST00000550961 817 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC11.88□□□□□ -0.51
ZIC3O60481 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 AL139339.2-201ENST00000608063 657 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 HRC-203ENST00000595625 2044 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
ZIC3O60481 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ZIC3O60481 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 TEDDM2P-201ENST00000414169 786 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 IDS-203ENST00000428056 1213 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 CDCA4P4-201ENST00000435216 680 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 RBM14-205ENST00000443702 732 ntTSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 RN7SL684P-201ENST00000465665 294 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 RPL7AP53-201ENST00000468834 793 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 RPSAP70-201ENST00000504462 864 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC079414.2-201ENST00000567157 1104 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 AC133555.4-201ENST00000569081 152 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC11.87□□□□□ -0.51
ZIC3O60481 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 ETV2-207ENST00000619399 994 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 PABPC1P2-201ENST00000471997 1805 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 NUTM2HP-201ENST00000442076 2498 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 LINC02228-202ENST00000641261 2489 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.87□□□□□ -0.51
ZIC3O60481 AC008806.1-201ENST00000624962 2443 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms