Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ST3GAL1P1-201ENST00000513810 1014 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 PIGCP1-201ENST00000527583 895 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC090825.2-201ENST00000557959 739 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC090616.6-202ENST00000583601 1088 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC091736.1-201ENST00000609370 305 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 RCC2P1-201ENST00000452257 1476 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 LINC02486-201ENST00000604157 3000 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 DMBT1P1-203ENST00000636837 4628 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 KRT18P45-201ENST00000515347 1333 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AC105206.1-202ENST00000314927 2368 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 MKRN7P-201ENST00000433469 1371 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 EEF1GP3-201ENST00000421044 1288 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AC010442.2-201ENST00000509301 407 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 MIR4539-201ENST00000579784 60 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 KRT18P8-201ENST00000581937 1246 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AL109983.1-201ENST00000603234 646 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AL121992.3-201ENST00000606186 346 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AL031587.5-201ENST00000624344 1849 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TUBB8P4-201ENST00000511806 1324 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 CD9-212ENST00000610354 1315 ntTSL 5 BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 AC023794.5-201ENST00000564380 2157 ntBASIC13.13□□□□□ -0.31
NCDNQ9UBB6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NCDNQ9UBB6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 HSPA8P5-201ENST00000456928 2069 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms