Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC27P30260 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC15.33■□□□□ 0.05
CDC27P30260 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CDC27P30260 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CDC27P30260 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDC27P30260 AC087386.2-201ENST00000623212 4637 ntBASIC15.33■□□□□ 0.05
CDC27P30260 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC27P30260 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDC27P30260 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC27P30260 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 AC253536.4-201ENST00000440539 267 ntBASIC15.33■□□□□ 0.04
CDC27P30260 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 AC092862.1-201ENST00000541534 533 ntBASIC15.33■□□□□ 0.04
CDC27P30260 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC27P30260 RPSAP67-201ENST00000584105 862 ntBASIC15.33■□□□□ 0.04
CDC27P30260 AC010632.2-201ENST00000588369 1224 ntBASIC15.33■□□□□ 0.04
CDC27P30260 TYMSP2-201ENST00000589501 424 ntBASIC15.33■□□□□ 0.04
CDC27P30260 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
CDC27P30260 AC010531.8-201ENST00000623341 685 ntBASIC15.33■□□□□ 0.04
CDC27P30260 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 AP000769.1-203ENST00000637245 208 ntBASIC15.33■□□□□ 0.04
CDC27P30260 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 DDX11L2-201ENST00000437401 1398 ntBASIC15.33■□□□□ 0.04
CDC27P30260 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 GOLGA2P5-201ENST00000266746 2395 ntBASIC15.33■□□□□ 0.04
CDC27P30260 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDC27P30260 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC27P30260 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC27P30260 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.32■□□□□ 0.04
CDC27P30260 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC27P30260 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 HSD3BP1-201ENST00000286193 1111 ntBASIC15.32■□□□□ 0.04
CDC27P30260 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC15.32■□□□□ 0.04
CDC27P30260 AL136084.1-201ENST00000449172 318 ntBASIC15.32■□□□□ 0.04
CDC27P30260 AC015818.1-201ENST00000451011 244 ntBASIC15.32■□□□□ 0.04
CDC27P30260 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 PRDX2P3-201ENST00000515779 586 ntBASIC15.32■□□□□ 0.04
CDC27P30260 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC27P30260 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC15.32■□□□□ 0.04
CDC27P30260 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 AC011700.1-201ENST00000610409 2627 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms